RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 MCTP1Q6DN14 999 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 LRSAM1Q6UWE0 723 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 EPHX4Q8IUS5 362 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 MARCH10Q8NA82 808 aaPredicted RBP10.07□□□□□ -0.8
RPSA-209ENST00000495394 UCN2Q96RP3 112 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 STRBPQ96SI9 672 aaKnown RBP10.07□□□□□ -0.8
RPSA-209ENST00000495394 TSG101Q99816 390 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 PUS3Q9BZE2 481 aaKnown RBP10.07□□□□□ -0.8
RPSA-209ENST00000495394 FARSBQ9NSD9 589 aaKnown RBP10.07□□□□□ -0.8
RPSA-209ENST00000495394 TEKT2Q9UIF3 430 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 RASAL2Q9UJF2 1139 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 DSEQ9UL01 958 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 RTCBQ9Y3I0 505 aaKnown RBP10.07□□□□□ -0.8
RPSA-209ENST00000495394 ITGB4P16144 1822 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 TOGARAM1Q9Y4F4 1720 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 ADAMTS7Q9UKP4 1686 aa10.07□□□□□ -0.8
RPSA-209ENST00000495394 SLC12A8A0AV02 714 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 ESYT3A0FGR9 886 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 FAM155AB1AL88 458 aaPredicted RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 B4DLN1 442 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 UBXN8O00124 270 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 ARHGAP33O14559 1287 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 LZTS3O60299 673 aaPredicted RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 EZRP15311 586 aaKnown RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 PMLP29590 882 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 RPP38P78345 283 aaKnown RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 ST5P78524 1137 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 ZBTB16Q05516 673 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 VAC14Q08AM6 782 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 PICALMQ13492 652 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 Q3ZCU0 254 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 CCDC40Q4G0X9 1142 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 BNC2Q6ZN30 1099 aaPredicted RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 ARHGAP36Q6ZRI8 547 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 SIX5Q8N196 739 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 ZNF619Q8N2I2 560 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 SHCBP1Q8NEM2 672 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 FAM20AQ96MK3 541 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 TCEANC2Q96MN5 208 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 AIFM2Q9BRQ8 373 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 ISCA1Q9BUE6 129 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 TNS1Q9HBL0 1735 aaKnown RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 A0A0G2JPF8 293 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 HNRNPCL3B7ZW38 293 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 KRIT1O00522 736 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 BIRC5O15392 142 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 LARGE1O95461 756 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 HNRNPCL4P0DMR1 293 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 DLATP10515 647 aaKnown RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 GNAT1P11488 350 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 IL32P24001 234 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 MAPK1P28482 360 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 GNAI1P63096 354 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 E2F2Q14209 437 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 SPCS2Q15005 226 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 SLC27A3Q5K4L6 730 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 C6orf118Q5T5N4 469 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 ZNF704Q6ZNC4 412 aaPredicted RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 PLEKHM3Q6ZWE6 761 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 GATAD2AQ86YP4 633 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 NKAIN4Q8IVV8 208 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 ZNF565Q8N9K5 539 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 PHACTR3Q96KR7 559 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 BARD1Q99728 777 aaKnown RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 UBXN6Q9BZV1 441 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 ZNF277Q9NRM2 450 aaPredicted RBP10.06□□□□□ -0.8
RPSA-209ENST00000495394 CLEC4AQ9UMR7 237 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 C15orf41Q9Y2V0 281 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 MAP3K5Q99683 1374 aa10.06□□□□□ -0.8
RPSA-209ENST00000495394 SGK1O00141 431 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 TRDMT1O14717 391 aaKnown RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 MTSS1O43312 755 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 FGF18O76093 207 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 SLITRK3O94933 977 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 PGRP06401 933 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 PHKG2P15735 406 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 MX2P20592 715 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 XPAP23025 273 aaPredicted RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 PTGS2P35354 604 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 NR5A1Q13285 461 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 IFIT5Q13325 482 aaKnown RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 PPP2R5DQ14738 602 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 MLC1Q15049 377 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 ELF2Q15723 593 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 CFAP221Q4G0U5 840 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 C1orf141Q5JVX7 400 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 ZNF530Q6P9A1 599 aaPredicted RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 HS6ST2Q96MM7 605 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 NUDT16L1Q9BRJ7 211 aaKnown RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 GPATCH1Q9BRR8 931 aaKnown RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 KIAA1683Q9H0B3 1180 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 MROH8Q9H579 483 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 MCM9Q9NXL9 1143 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 NKIRAS2Q9NYR9 191 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.05□□□□□ -0.8
RPSA-209ENST00000495394 GOLGA8IPA6NC78 632 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 CDK2AP1O14519 115 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms