RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ADGRA3Q8IWK6 1321 aa12.11□□□□□ -0.47
PKP4-215ENST00000494945 MYADML2A6NDP7 307 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 LRRIQ4A6NIV6 560 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 SLC16A3O15427 465 aaKnown RBP12.1□□□□□ -0.47
PKP4-215ENST00000494945 SMIM10L2AP0DMW4 78 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 SMIM10L2BP0DMW5 78 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 MTIF2P46199 727 aaKnown RBP12.1□□□□□ -0.47
PKP4-215ENST00000494945 EFNA5P52803 228 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 COPB1P53618 953 aaKnown RBP12.1□□□□□ -0.47
PKP4-215ENST00000494945 MARSP56192 900 aaKnown RBP12.1□□□□□ -0.47
PKP4-215ENST00000494945 IRX5P78411 483 aaPredicted RBP12.1□□□□□ -0.47
PKP4-215ENST00000494945 POU5F1BQ06416 359 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 DRP2Q13474 957 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 MARCH8Q5T0T0 291 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 CDCA2Q69YH5 1023 aaPredicted RBP12.1□□□□□ -0.47
PKP4-215ENST00000494945 KSR1Q8IVT5 923 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 ZBTB8OSQ8IWT0 167 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 METTL13Q8N6R0 699 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
PKP4-215ENST00000494945 KLHDC9Q8NEP7 349 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 KIFC3Q9BVG8 833 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 HMX1Q9NP08 348 aaPredicted RBP12.1□□□□□ -0.47
PKP4-215ENST00000494945 AGPAT3Q9NRZ7 376 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 DMAC2Q9NW81 257 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 PTCH2Q9Y6C5 1203 aa12.1□□□□□ -0.47
PKP4-215ENST00000494945 MBLAC1A4D2B0 266 aaPredicted RBP12.09□□□□□ -0.47
PKP4-215ENST00000494945 K7ERI5 159 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 N4BP3O15049 544 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 PGK1P00558 417 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 GNAT1P11488 350 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 HOXC8P31273 242 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 CLCN3P51790 818 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 STRN3Q13033 797 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 NR1I3Q14994 352 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 CCDC40Q4G0X9 1142 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 FRMD5Q7Z6J6 570 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 RHPN2Q8IUC4 686 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 CREBRFQ8IUR6 639 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 DNAJC5GQ8N7S2 189 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 NAP1L5Q96NT1 182 aaPredicted RBP12.09□□□□□ -0.47
PKP4-215ENST00000494945 MAP7D2Q96T17 732 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 TUBGCP2Q9BSJ2 902 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 MKNK1Q9BUB5 465 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 NFKBIZQ9BYH8 718 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 RTN4Q9NQC3 1192 aaKnown RBP12.09□□□□□ -0.47
PKP4-215ENST00000494945 SETD4Q9NVD3 440 aa12.09□□□□□ -0.47
PKP4-215ENST00000494945 LGALS16A8MUM7 142 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 GOLGA6L6A8MZA4 724 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 CLIC2O15247 247 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 PIGRP01833 764 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
PKP4-215ENST00000494945 PHKA2P46019 1235 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 ADAM17P78536 824 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 CDC42EP1Q00587 391 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 PPP2R3AQ06190 1150 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 HSP90AA2PQ14568 343 aaPredicted RBP12.08□□□□□ -0.48
PKP4-215ENST00000494945 MAN2A1Q16706 1144 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 TAS1R3Q7RTX0 852 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 RNF180Q86T96 592 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
PKP4-215ENST00000494945 DRC7Q8IY82 874 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 C7orf31Q8N865 590 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 RNF149Q8NC42 400 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 EEF2KMTQ96G04 330 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 VPS16Q9H269 839 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 METTL14Q9HCE5 456 aaKnown RBP12.08□□□□□ -0.48
PKP4-215ENST00000494945 INTS13Q9NVM9 706 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 TAB2Q9NYJ8 693 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 FRMD4BQ9Y2L6 1034 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 PTPN22Q9Y2R2 807 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 PCNTO95613 3336 aa12.08□□□□□ -0.48
PKP4-215ENST00000494945 SMIM35A0A1B0GVV1 85 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 C17orf102A2RUQ5 167 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 HNRNPDLO14979 420 aaKnown RBP12.07□□□□□ -0.48
PKP4-215ENST00000494945 KIAA0391O15091 583 aaKnown RBP12.07□□□□□ -0.48
PKP4-215ENST00000494945 MAPK13O15264 365 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 CABYRO75952 493 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 ASGR1P07306 291 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 SRGAP2CP0DJJ0 459 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 CYP2C9P11712 490 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 PRKCSHP14314 528 aaPredicted RBP12.07□□□□□ -0.48
PKP4-215ENST00000494945 GARTP22102 1010 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 PSMC2P35998 433 aaKnown RBP12.07□□□□□ -0.48
PKP4-215ENST00000494945 CHMP4BP1P59074 171 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 PTENP60484 403 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 KCNA10Q16322 511 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 MAPK6Q16659 721 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 CCSAPQ6IQ19 270 aaPredicted RBP12.07□□□□□ -0.48
PKP4-215ENST00000494945 ARMCX5Q6P1M9 558 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 CXCL17Q6UXB2 119 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 ZPBP2Q6X784 338 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 ZNF410Q86VK4 478 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 VSTM4Q8IW00 320 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 TRIM59Q8IWR1 403 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 XXYLT1Q8NBI6 393 aa12.07□□□□□ -0.48
PKP4-215ENST00000494945 BICD1Q96G01 975 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms