RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	HOXA11	P31270	313 aa	Predicted RBP	11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	PPM1A	P35813	382 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	TEC	P42680	631 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	GATM	P50440	423 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	CUL4A	Q13619	759 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	GNL2	Q13823	731 aa	Known RBP	11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	TFDP1	Q14186	410 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	PAN2	Q504Q3	1202 aa	Known RBP	11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	TCEAL5	Q5H9L2	206 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	CLLU1OS	Q5K130	101 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	LRRC55	Q6ZSA7	311 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	CATSPER4	Q7RTX7	472 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	COLGALT1	Q8NBJ5	622 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	RNF149	Q8NC42	400 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	CNNM3	Q8NE01	707 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	MCPH1	Q8NEM0	835 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	ADAMTS19	Q8TE59	1207 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	PPP2R3C	Q969Q6	453 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	ZNF668	Q96K58	619 aa	Predicted RBP	11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	NLRP4	Q96MN2	994 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	BACH2	Q9BYV9	841 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	RAB34	Q9BZG1	259 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	MINDY3	Q9H8M7	445 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	FAM105A	Q9NUU6	356 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	PLXNA4	Q9HCM2	1894 aa		11.44	□□□□□ -0.58
NEPRO-222	ENST00000494891	ZMYM2	Q9UBW7	1377 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	CNTNAP2	Q9UHC6	1331 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	ATP2B1	P20020	1258 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	DNAJB1	P25685	340 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	GJB2	P29033	226 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	PTGDR	Q13258	359 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	TWF2	Q6IBS0	349 aa	Known RBP	11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	ABI1	Q8IZP0	508 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	PIGO	Q8TEQ8	1089 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	POF1B	Q8WVV4	589 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	PGBD4	Q96DM1	585 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	ALG13	Q9NP73	1137 aa	Known RBP	11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	PIN4	Q9Y237	131 aa	Known RBP	11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	PCDHB6	Q9Y5E3	794 aa		11.43	□□□□□ -0.58
NEPRO-222	ENST00000494891	TNFRSF10A	O00220	468 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	FSCN2	O14926	492 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	FGF18	O76093	207 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	SRGAP2C	P0DJJ0	459 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	CYP11B2	P19099	503 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	NCL	P19338	710 aa	Known RBP	11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	GLRA2	P23416	452 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	LTBR	P36941	435 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	KCNQ1	P51787	676 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	MBTD1	Q05BQ5	628 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	HYAL1	Q12794	435 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	CAPS	Q13938	189 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	AMHR2	Q16671	573 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	FAM187B	Q17R55	369 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	UBXN11	Q5T124	520 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	KCNT2	Q6UVM3	1135 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	ASAP3	Q8TDY4	903 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	MRPS27	Q92552	414 aa	Known RBP	11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	PRIMPOL	Q96LW4	560 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	UHRF1	Q96T88	793 aa	Predicted RBP	11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	CDCA3	Q99618	268 aa	Predicted RBP	11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	UBN1	Q9NPG3	1134 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	TLR9	Q9NR96	1032 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	STK39	Q9UEW8	545 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	LRWD1	Q9UFC0	647 aa		11.42	□□□□□ -0.58
NEPRO-222	ENST00000494891	SLC26A4	O43511	780 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	TSPAN1	O60635	241 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	OFD1	O75665	1012 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	ATP2C1	P98194	919 aa	Predicted RBP	11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	NCBP1	Q09161	790 aa	Known RBP	11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	ADAM15	Q13444	863 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	HYI	Q5T013	277 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	NOTUM	Q6P988	496 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	POTEG	Q6S5H5	508 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	GLB1L	Q6UWU2	654 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	SLC39A11	Q8N1S5	342 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	EFHB	Q8N7U6	833 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	HELQ	Q8TDG4	1101 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	INTS4	Q96HW7	963 aa	Known RBP	11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	CCDC43	Q96MW1	224 aa	Known RBP	11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	ZNF558	Q96NG5	402 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	NGRN	Q9NPE2	291 aa	Known RBP	11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	SPG21	Q9NZD8	308 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	KANSL3	Q9P2N6	904 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	SMC3	Q9UQE7	1217 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	PCDHB2	Q9Y5E7	798 aa		11.41	□□□□□ -0.58
NEPRO-222	ENST00000494891	TCF20	Q9UGU0	1960 aa	Known RBP	11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891		A0A1B0GUA9	196 aa		11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891	GRXCR2	A6NFK2	248 aa		11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891		H3BQV1	296 aa		11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891	USO1	O60763	962 aa	Known RBP	11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891	ERLIN2	O94905	339 aa		11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891	KCNA5	P22460	613 aa		11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891	IRS1	P35568	1242 aa		11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891	NAMPT	P43490	491 aa		11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891	ALDH7A1	P49419	539 aa	Known RBP	11.4	□□□□□ -0.58
NEPRO-222	ENST00000494891	KRT17	Q04695	432 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms