RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 C10orf82Q8WW14 230 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 GAB3Q8WWW8 586 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ART4Q93070 314 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 SNX27Q96L92 541 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TRIM47Q96LD4 638 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 NOC4LQ9BVI4 516 aaKnown RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 SPZ1Q9BXG8 430 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 SLC26A6Q9BXS9 759 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TMOD4Q9NZQ9 345 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 DNAJC5BQ9UF47 199 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ROBO2Q9HCK4 1378 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 SCN4AP35499 1836 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TRIM49BA6NDI0 452 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TCP11X1B4DZS4 312 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 DDX3XO00571 662 aaKnown RBP eCLIP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 PODXLO00592 558 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 PRPF4O43172 522 aaKnown RBP eCLIP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 MAP3K7O43318 606 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 PHF2O75151 1096 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ZNF189O75820 626 aaPredicted RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 RAPGEF3O95398 923 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ZBED1O96006 694 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 EIF2S1P05198 315 aaKnown RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 XBP1P17861 261 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 GTF2H1P32780 548 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 GUCY1A2P33402 732 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 HOXD12P35452 270 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 IFI35P80217 286 aaPredicted RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 NONOQ15233 471 aaKnown RBP eCLIP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 CLEC16AQ2KHT3 1053 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 PROSER3Q2NL68 480 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TTC38Q5R3I4 469 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 GALNT17Q6IS24 598 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 NEPROQ6NW34 567 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 CCDC174Q6PII3 467 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 SPATA24Q86W54 205 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 LONP2Q86WA8 852 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 DQX1Q8TE96 717 aaKnown RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 FAM81BQ96LP2 452 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 PRICKLE1Q96MT3 831 aaPredicted RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 BIRC8Q96P09 236 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ZCWPW1Q9H0M4 648 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 HERC5Q9UII4 1024 aaKnown RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 CROTQ9UKG9 612 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ANGPTL2Q9UKU9 493 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TNRC6CQ9HCJ0 1690 aaKnown RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 SCN7AQ01118 1682 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 CETN3O15182 167 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 EPHB6O15197 1021 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 PEX1O43933 1283 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 CBFA2T3O75081 653 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 NOL4O94818 638 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 IFIT1P09914 478 aaKnown RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ADD2P35612 726 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 NT5C2P49902 561 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 EHHADHQ08426 723 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 NEXNQ0ZGT2 675 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TBL3Q12788 808 aaKnown RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 STRN3Q13033 797 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 RTN1Q16799 776 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TMCO4Q5TGY1 634 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 B3GNT6Q6ZMB0 384 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TMTC3Q6ZXV5 915 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 METTL13Q8N6R0 699 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ATP11CQ8NB49 1132 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 SPATA5Q8NB90 893 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TPCN2Q8NHX9 752 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 AK8Q96MA6 479 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 ARPC5LQ9BPX5 153 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TRIM33Q9UPN9 1127 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 STK38LQ9Y2H1 464 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 THRAP3Q9Y2W1 955 aaKnown RBP5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TTLL3Q9Y4R7 772 aa5.16□□□□□ -1.58
PRKD3-210ENST00000494667 TRPM3Q9HCF6 1732 aaPredicted RBP5.15□□□□□ -1.58
PRKD3-210ENST00000494667 HTR3EA5X5Y0 456 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 ATP5BP06576 529 aaKnown RBP5.15□□□□□ -1.58
PRKD3-210ENST00000494667 SPATA31D3P0C874 917 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 PTPN2P17706 415 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 CTNNA2P26232 953 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 CASP1P29466 404 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 SESN3P58005 492 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 GFPT1Q06210 699 aaPredicted RBP5.15□□□□□ -1.58
PRKD3-210ENST00000494667 CDK18Q07002 472 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 TMEM62Q0P6H9 643 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 NR5A1Q13285 461 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 CYLC2Q14093 348 aaPredicted RBP5.15□□□□□ -1.58
PRKD3-210ENST00000494667 ANKRD40Q6AI12 368 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 AAGABQ6PD74 315 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 ARHGEF18Q6ZSZ5 1173 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 SPATA31D4Q6ZUB0 917 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 NT5DC3Q86UY8 548 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 PPFIBP2Q8ND30 876 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 OXER1Q8TDS5 423 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 DENND1AQ8TEH3 1009 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 SGF29Q96ES7 293 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 DDX27Q96GQ7 796 aaKnown RBP5.15□□□□□ -1.58
PRKD3-210ENST00000494667 TMEM60Q9H2L4 133 aa5.15□□□□□ -1.58
PRKD3-210ENST00000494667 PPP1R1BQ9UD71 204 aaPredicted RBP5.15□□□□□ -1.58
PRKD3-210ENST00000494667 SAP30BPQ9UHR5 308 aaKnown RBP5.15□□□□□ -1.58
PRKD3-210ENST00000494667 EFR3BQ9Y2G0 817 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms