RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 NFKBIZQ9BYH8 718 aa17.91■□□□□ 0.46
SATB1-217ENST00000493952 POLD4Q9HCU8 107 aa17.91■□□□□ 0.46
SATB1-217ENST00000493952 MYO7AQ13402 2215 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 LRRIQ4A6NIV6 560 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 TBKBP1A7MCY6 615 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 INO80B-WBP1J3KQ70 363 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 GTPBP6O43824 516 aaPredicted RBP17.9■□□□□ 0.46
SATB1-217ENST00000493952 TSPAN1O60635 241 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 ERLIN2O94905 339 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 HOXA11P31270 313 aaPredicted RBP17.9■□□□□ 0.46
SATB1-217ENST00000493952 CTNNB1P35222 781 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 LONP1P36776 959 aaKnown RBP17.9■□□□□ 0.46
SATB1-217ENST00000493952 TMEM119Q4V9L6 283 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 MICALL1Q8N3F8 863 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 PPM1EQ8WY54 764 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 CDK5RAP3Q96JB5 506 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 RUSC1Q9BVN2 902 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 NT5C3AQ9H0P0 336 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 FAM105AQ9NUU6 356 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 HCSTQ9UBK5 93 aa17.9■□□□□ 0.46
SATB1-217ENST00000493952 FBXO2Q9UK22 296 aaPredicted RBP17.9■□□□□ 0.46
SATB1-217ENST00000493952 REV3LO60673 3130 aa17.89■□□□□ 0.46
SATB1-217ENST00000493952 C5orf67F2Z3F1 127 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 H3BNC9 293 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 EOMESO95936 686 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 MARCKSP29966 332 aaPredicted RBP17.89■□□□□ 0.45
SATB1-217ENST00000493952 BMPR1AP36894 532 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 UBA7P41226 1012 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 GPM6BQ13491 265 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 PCBP1Q15365 356 aaKnown RBP eCLIP17.89■□□□□ 0.45
SATB1-217ENST00000493952 CCDC85BQ15834 202 aaPredicted RBP17.89■□□□□ 0.45
SATB1-217ENST00000493952 AMHR2Q16671 573 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 CLLU1OSQ5K130 101 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 FOXD4L5Q5VV16 416 aaPredicted RBP17.89■□□□□ 0.45
SATB1-217ENST00000493952 FOXD4L4Q8WXT5 416 aaPredicted RBP17.89■□□□□ 0.45
SATB1-217ENST00000493952 RWDD3Q9Y3V2 267 aa17.89■□□□□ 0.45
SATB1-217ENST00000493952 CITO14578 2027 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 HOXA2O43364 376 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 SLC26A4O43511 780 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 ZSCAN22P10073 491 aaPredicted RBP17.88■□□□□ 0.45
SATB1-217ENST00000493952 RAB27AP51159 221 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 PKP1Q13835 747 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 UBXN11Q5T124 520 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 CDCA2Q69YH5 1023 aaPredicted RBP17.88■□□□□ 0.45
SATB1-217ENST00000493952 RINT1Q6NUQ1 792 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 KCTD17Q8N5Z5 321 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 LRRC15Q8TF66 581 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 KIFAP3Q92845 792 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 LPPQ93052 612 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 CALML4Q96GE6 196 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 CPB2Q96IY4 423 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 CASD1Q96PB1 797 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 TMEM117Q9H0C3 514 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 CSRNP2Q9H175 543 aa17.88■□□□□ 0.45
SATB1-217ENST00000493952 MEIS3P2A8K0S8 358 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 B4GALT5O43286 388 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 ZNF623O75123 536 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 F13A1P00488 732 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 SSBP05455 408 aaKnown RBP eCLIP17.87■□□□□ 0.45
SATB1-217ENST00000493952 RB1P06400 928 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 PDIA4P13667 645 aaKnown RBP17.87■□□□□ 0.45
SATB1-217ENST00000493952 ARF4P18085 180 aaPredicted RBP17.87■□□□□ 0.45
SATB1-217ENST00000493952 NAMPTP43490 491 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 NASPP49321 788 aaPredicted RBP17.87■□□□□ 0.45
SATB1-217ENST00000493952 SLC12A3P55017 1021 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 KARSQ15046 597 aaKnown RBP17.87■□□□□ 0.45
SATB1-217ENST00000493952 PPP2R5AQ15172 486 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 LONRF3Q496Y0 759 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 SPECC1Q5M775 1068 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 C1orf186Q6ZWK4 172 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 ABI1Q8IZP0 508 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 DAW1Q8N136 415 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 SYT2Q8N9I0 419 aaPredicted RBP17.87■□□□□ 0.45
SATB1-217ENST00000493952 HELQQ8TDG4 1101 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 CLIC6Q96NY7 704 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 TYW1Q9NV66 732 aaKnown RBP17.87■□□□□ 0.45
SATB1-217ENST00000493952 LMCD1Q9NZU5 365 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 PCDHB2Q9Y5E7 798 aa17.87■□□□□ 0.45
SATB1-217ENST00000493952 SRPRBQ9Y5M8 271 aaKnown RBP17.87■□□□□ 0.45
SATB1-217ENST00000493952 PDCD11Q14690 1871 aaKnown RBP17.86■□□□□ 0.45
SATB1-217ENST00000493952 BRWD1Q9NSI6 2320 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 HIP1RO75146 1068 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 PLA2G4BP0C869 781 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 SKIP12755 728 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 AXLP30530 894 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 MAPK7Q13164 816 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 SLC39A14Q15043 492 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 NOTUMQ6P988 496 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 LRRC55Q6ZSA7 311 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 USP49Q70CQ1 688 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 ZBTB8OSQ8IWT0 167 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 LRRC43Q8N309 656 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 EPSTI1Q96J88 318 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 C11orf84Q9BUA3 381 aaPredicted RBP17.86■□□□□ 0.45
SATB1-217ENST00000493952 KIFC3Q9BVG8 833 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 PLVAPQ9BX97 442 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 EIF2AQ9BY44 585 aaKnown RBP17.86■□□□□ 0.45
SATB1-217ENST00000493952 CCDC113Q9H0I3 377 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 C2orf40Q9H1Z8 148 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 FZD8Q9H461 694 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms