RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ACCSQ96QU6 501 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 RASSF4Q9H2L5 321 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 ANKEF1Q9NU02 776 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 PSD3Q9NYI0 1048 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 MAFGO15525 162 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 KCTD19Q17RG1 926 aaPredicted RBP14.98□□□□□ -0.01
VCP-207ENST00000493886 PLA2G4FQ68DD2 849 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 IQCEQ6IPM2 695 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 ZNF746Q6NUN9 644 aaPredicted RBP14.98□□□□□ -0.01
VCP-207ENST00000493886 GJB7Q6PEY0 223 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 RPGRIP1Q96KN7 1286 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 LRRC1Q9BTT6 524 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 MOV10L1Q9BXT6 1211 aaKnown RBP14.98□□□□□ -0.01
VCP-207ENST00000493886 ACAD9Q9H845 621 aa14.98□□□□□ -0.01
VCP-207ENST00000493886 CWC15Q9P013 229 aaKnown RBP14.98□□□□□ -0.01
VCP-207ENST00000493886 MYO1CO00159 1063 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 TRIM49P0CI25 452 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 TRIM49CP0CI26 452 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 PRKCIP41743 596 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 NPEPPSP55786 919 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 MAP9Q49MG5 647 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 ARMCX6Q7L4S7 300 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 GOLGA6L1Q8N7Z2 621 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 RDH13Q8NBN7 331 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.97□□□□□ -0.014e-11■■□□□ 13
VCP-207ENST00000493886 GPRC5CQ9NQ84 441 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 CYP39A1Q9NYL5 469 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 PCDHA10Q9Y5I2 948 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 POLR2AP24928 1970 aaKnown RBP14.97□□□□□ -0.01
VCP-207ENST00000493886 SPDYE16A6NNV3 312 aaPredicted RBP14.97□□□□□ -0.01
VCP-207ENST00000493886 PRLRP16471 622 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 LMNB1P20700 586 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 BFSP1Q12934 665 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 NAB2Q15742 525 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 CBWD6Q4V339 395 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 CBWD3Q5JTY5 395 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 CBWD5Q5RIA9 395 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 SND1Q7KZF4 910 aaKnown RBP eCLIP14.97□□□□□ -0.012e-7■■■□□ 16
VCP-207ENST00000493886 HAUS6Q7Z4H7 955 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 CREG2Q8IUH2 290 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 AFAP1L1Q8TED9 768 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 SENP7Q9BQF6 1050 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 MED4Q9NPJ6 270 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 A1CFQ9NQ94 594 aaKnown RBP14.97□□□□□ -0.01
VCP-207ENST00000493886 HOXC10Q9NYD6 342 aa14.97□□□□□ -0.01
VCP-207ENST00000493886 TISP43B9A030 160 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 KLRC1P26715 233 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 PEX3P56589 373 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 GTF2BQ00403 316 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 KIAA0753Q2KHM9 967 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 PACSIN1Q9BY11 444 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 ST6GALNAC4Q9H4F1 302 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 PCIF1Q9H4Z3 704 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 RRP15Q9Y3B9 282 aaKnown RBP14.96□□□□□ -0.01
VCP-207ENST00000493886 KIAA1217Q5T5P2 1943 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 CCDC189A1A4V9 331 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 USP2O75604 605 aaPredicted RBP14.96□□□□□ -0.01
VCP-207ENST00000493886 RGS20O76081 388 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 KCNA2P16389 499 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 RNASE9P60153 205 aaKnown RBP14.96□□□□□ -0.01
VCP-207ENST00000493886 PTPROQ16827 1216 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 FAM102BQ5T8I3 360 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 CCDC181Q5TID7 509 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 ANO5Q75V66 913 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 MS4A14Q96JA4 679 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 HYOU1Q9Y4L1 999 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 MYPNQ86TC9 1320 aa14.96□□□□□ -0.01
VCP-207ENST00000493886 ZC3H4Q9UPT8 1303 aaKnown RBP14.96□□□□□ -0.01
VCP-207ENST00000493886 SLC16A4O15374 487 aa14.96□□□□□ -0.02
VCP-207ENST00000493886 TUBBP07437 444 aa14.96□□□□□ -0.02
VCP-207ENST00000493886 KRT13P13646 458 aa14.96□□□□□ -0.02
VCP-207ENST00000493886 TCP1P17987 556 aaKnown RBP14.96□□□□□ -0.02
VCP-207ENST00000493886 MYL7Q01449 175 aa14.96□□□□□ -0.02
VCP-207ENST00000493886 C10orf76Q5T2E6 689 aa14.96□□□□□ -0.02
VCP-207ENST00000493886 TTC19Q6DKK2 380 aaPredicted RBP14.96□□□□□ -0.02
VCP-207ENST00000493886 C12orf56Q8IXR9 622 aa14.96□□□□□ -0.02
VCP-207ENST00000493886 TMEM174Q8WUU8 243 aa14.96□□□□□ -0.02
VCP-207ENST00000493886 OSBPL9Q96SU4 736 aa14.96□□□□□ -0.02
VCP-207ENST00000493886 DICER1Q9UPY3 1922 aaKnown RBP14.96□□□□□ -0.02
VCP-207ENST00000493886 FAM170AA1A519 330 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 NCKAP1LP55160 1127 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 SH3D19Q5HYK7 790 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 LRRC31Q6UY01 552 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 CCNI2Q6ZMN8 369 aaPredicted RBP14.95□□□□□ -0.02
VCP-207ENST00000493886 SRLQ86TD4 932 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 CBWD1Q9BRT8 395 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 CXorf56Q9H5V9 222 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 GABBR1Q9UBS5 961 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 FERP16591 822 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 ANXA13P27216 316 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 STAT1P42224 750 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 INTS8Q75QN2 995 aaKnown RBP14.95□□□□□ -0.02
VCP-207ENST00000493886 SPATA4Q8NEY3 305 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 TLR10Q9BXR5 811 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 INTS2Q9H0H0 1204 aaKnown RBP14.95□□□□□ -0.02
VCP-207ENST00000493886 NAGPAQ9UK23 515 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 DNAJC12Q9UKB3 198 aa14.95□□□□□ -0.02
VCP-207ENST00000493886 PACSIN2Q9UNF0 486 aaPredicted RBP14.95□□□□□ -0.02
VCP-207ENST00000493886 WDR81Q562E7 1941 aa14.94□□□□□ -0.02
VCP-207ENST00000493886 GFPT2O94808 682 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms