RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 CTC1Q2NKJ3 1217 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 KCNT2Q6UVM3 1135 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 CATSPER3Q86XQ3 398 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 MICAL1Q8TDZ2 1067 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 PPP2R3CQ969Q6 453 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 TMX3Q96JJ7 454 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 TRAIPQ9BWF2 469 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 TUFT1Q9NNX1 390 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 USO1O60763 962 aaKnown RBP16.69■□□□□ 0.26
TOM1-215ENST00000491987 SKIP12755 728 aa16.69■□□□□ 0.26
TOM1-215ENST00000491987 U2AF2P26368 475 aaKnown RBP eCLIP16.69■□□□□ 0.26
TOM1-215ENST00000491987 LTBRP36941 435 aa16.69■□□□□ 0.26
TOM1-215ENST00000491987 NRIP1P48552 1158 aa16.69■□□□□ 0.26
TOM1-215ENST00000491987 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
TOM1-215ENST00000491987 DLX2Q07687 328 aaPredicted RBP16.69■□□□□ 0.26
TOM1-215ENST00000491987 CAPSQ13938 189 aa16.69■□□□□ 0.26
TOM1-215ENST00000491987 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
TOM1-215ENST00000491987 RBM23Q86U06 439 aaKnown RBP16.69■□□□□ 0.26
TOM1-215ENST00000491987 ASAP3Q8TDY4 903 aa16.69■□□□□ 0.26
TOM1-215ENST00000491987 MRPL9Q9BYD2 267 aaKnown RBP16.69■□□□□ 0.26
TOM1-215ENST00000491987 TLR9Q9NR96 1032 aa16.69■□□□□ 0.26
TOM1-215ENST00000491987 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
TOM1-215ENST00000491987 GRXCR2A6NFK2 248 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 MEIS3P2A8K0S8 358 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 TBX10O75333 385 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 ERLIN2O94905 339 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 ERVFC1P60507 584 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 PLCB3Q01970 1234 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 TFDP1Q14186 410 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 CLUL1Q15846 466 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 PUS10Q3MIT2 529 aaKnown RBP16.68■□□□□ 0.26
TOM1-215ENST00000491987 POTEGQ6S5H5 508 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 MAEAQ7L5Y9 396 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 ERMNQ8TAM6 284 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 MRPS27Q92552 414 aaKnown RBP16.68■□□□□ 0.26
TOM1-215ENST00000491987 POLR3CQ9BUI4 534 aaPredicted RBP16.68■□□□□ 0.26
TOM1-215ENST00000491987 POLR3FQ9H1D9 316 aaPredicted RBP16.68■□□□□ 0.26
TOM1-215ENST00000491987 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 PCDHB2Q9Y5E7 798 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 BRWD1Q9NSI6 2320 aa16.68■□□□□ 0.26
TOM1-215ENST00000491987 ZNF623O75123 536 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 XRCC6P12956 609 aaKnown RBP eCLIP16.67■□□□□ 0.26
TOM1-215ENST00000491987 GLRA2P23416 452 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 HOXA11P31270 313 aaPredicted RBP16.67■□□□□ 0.26
TOM1-215ENST00000491987 PPM1AP35813 382 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 ARL2P36404 184 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 NDUFV1P49821 464 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 TOB1P50616 345 aaPredicted RBP16.67■□□□□ 0.26
TOM1-215ENST00000491987 PTENP60484 403 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 ADAM15Q13444 863 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 PLPP4Q5VZY2 271 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 GLB1LQ6UWU2 654 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 C4orf32Q8N8J7 132 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 PGBD4Q96DM1 585 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 TBC1D32Q96NH3 1257 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 NACC1Q96RE7 527 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 TLE6Q9H808 572 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 GPRC5CQ9NQ84 441 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 SPG21Q9NZD8 308 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 PUF60Q9UHX1 559 aaKnown RBP16.67■□□□□ 0.26
TOM1-215ENST00000491987 LZTS1Q9Y250 596 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 PCDHB6Q9Y5E3 794 aa16.67■□□□□ 0.26
TOM1-215ENST00000491987 NT5C1B-RDH14C9J2C7 533 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 INO80B-WBP1J3KQ70 363 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 TSPAN1O60635 241 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 RPA1P27694 616 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 GJB2P29033 226 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 FXR2P51116 673 aaKnown RBP eCLIP16.66■□□□□ 0.26
TOM1-215ENST00000491987 BCAR1P56945 870 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 MBTD1Q05BQ5 628 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 NOMO2Q5JPE7 1267 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 MCTP1Q6DN14 999 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 AGMOQ6ZNB7 445 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 FAM178BQ8IXR5 827 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 SLC39A11Q8N1S5 342 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 EFHBQ8N7U6 833 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 CPB2Q96IY4 423 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 TCF25Q9BQ70 676 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 ENTPD7Q9NQZ7 604 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 DBR1Q9UK59 544 aaKnown RBP16.66■□□□□ 0.26
TOM1-215ENST00000491987 MYO7AQ13402 2215 aa16.66■□□□□ 0.26
TOM1-215ENST00000491987 FSCN2O14926 492 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 PER2O15055 1255 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 ZC3H11AO75152 810 aaKnown RBP eCLIP16.65■□□□□ 0.26
TOM1-215ENST00000491987 OFD1O75665 1012 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 CCT6AP40227 531 aaKnown RBP16.65■□□□□ 0.26
TOM1-215ENST00000491987 MCM2P49736 904 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 KRT17Q04695 432 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 POU5F1BQ06416 359 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 PTGDRQ13258 359 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 HAUS3Q68CZ6 603 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 PDE12Q6L8Q7 609 aaKnown RBP16.65■□□□□ 0.26
TOM1-215ENST00000491987 MRPL10Q7Z7H8 261 aaKnown RBP16.65■□□□□ 0.26
TOM1-215ENST00000491987 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
TOM1-215ENST00000491987 RSPH1Q8WYR4 309 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 EIF2AQ9BY44 585 aaKnown RBP16.65■□□□□ 0.26
TOM1-215ENST00000491987 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 CD320Q9NPF0 282 aa16.65■□□□□ 0.26
TOM1-215ENST00000491987 TBC1D13Q9NVG8 400 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms