RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SYT10Q6XYQ8 523 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 IGSF22Q8N9C0 903 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 PIGOQ8TEQ8 1089 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 CEP170P1Q96L14 293 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 ADAMTS10Q9H324 1103 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 BMP2KQ9NSY1 1161 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 GINS2Q9Y248 185 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 NOC2LQ9Y3T9 749 aaKnown RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 CLIC4Q9Y696 253 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 CHD9Q3L8U1 2897 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 DKC1O60832 514 aaKnown RBP eCLIP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 H2AFXP16104 143 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 NLRP11P59045 1033 aaKnown RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 XKR9Q5GH70 373 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 TSHZ1Q6ZSZ6 1077 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 RTN4RL1Q86UN2 441 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 NEK9Q8TD19 979 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 LINC01599Q8WXQ3 324 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 SEPT8Q92599 483 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 OSMRQ99650 979 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 POLR3CQ9BUI4 534 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 TTYH1Q9H313 450 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 DHX33Q9H6R0 707 aaKnown RBP10.39□□□□□ -0.75
BRCA1-219ENST00000491747 AKT3Q9Y243 479 aa10.39□□□□□ -0.75
BRCA1-219ENST00000491747 M0QZ92 97 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 RPLP2P05387 115 aaKnown RBP10.38□□□□□ -0.75
BRCA1-219ENST00000491747 CMA1P23946 247 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 DNAJB2P25686 324 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 PRPHP41219 470 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 PDIA5Q14554 519 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 POTEGQ6S5H5 508 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 KSR1Q8IVT5 923 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 MMTAG2Q9BU76 263 aaKnown RBP10.38□□□□□ -0.75
BRCA1-219ENST00000491747 TMX1Q9H3N1 280 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 TUFT1Q9NNX1 390 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 ARGLU1Q9NWB6 273 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-219ENST00000491747 LRWD1Q9UFC0 647 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 PADI3Q9ULW8 664 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 PHLPP2Q6ZVD8 1323 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 LAD1O00515 517 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 CBFA2T2O43439 604 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 ARHGEF15O94989 841 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 RPA1P27694 616 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 RARRES1P49788 294 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 GPC3P51654 580 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 CRYBB1P53674 252 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-219ENST00000491747 ETF1P62495 437 aaKnown RBP10.38□□□□□ -0.75
BRCA1-219ENST00000491747 GRIN1Q05586 938 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 ERCC6LQ2NKX8 1250 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 OTUD6AQ7L8S5 288 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 HERC6Q8IVU3 1022 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 PHOSPHO2Q8TCD6 241 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 TMEM143Q96AN5 459 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 TIGD1Q96MW7 591 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 FAM161BQ96MY7 647 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 SLC9A7Q96T83 725 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 SRRTQ9BXP5 876 aaKnown RBP10.38□□□□□ -0.75
BRCA1-219ENST00000491747 XPNPEP1Q9NQW7 623 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.754e-6■■□□□ 13.9
BRCA1-219ENST00000491747 SQORQ9Y6N5 450 aa10.38□□□□□ -0.75
BRCA1-219ENST00000491747 BIN1O00499 593 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 ENPP3O14638 875 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 MGEA5O60502 916 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 CSDE1O75534 798 aaKnown RBP10.37□□□□□ -0.75
BRCA1-219ENST00000491747 TMOD1P28289 359 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 FANCCQ00597 558 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 NCAPHQ15003 741 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 FAM117BQ6P1L5 589 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 DTHD1Q6ZMT9 781 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 FAM228AQ86W67 206 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 APBB2Q92870 758 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 NKX2-4Q9H2Z4 354 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 ERVK-5Q9HDB9 667 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 ANKEF1Q9NU02 776 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 SUCLA2Q9P2R7 463 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-219ENST00000491747 CDH23Q9H251 3354 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 COL4A6Q14031 1691 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 VWA3AA6NCI4 1184 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 PFKFB1P16118 471 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 FGFR4P22455 802 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 CCT6AP40227 531 aaKnown RBP10.37□□□□□ -0.75
BRCA1-219ENST00000491747 POLGP54098 1239 aaPredicted RBP10.37□□□□□ -0.75
BRCA1-219ENST00000491747 EMC2Q15006 297 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 PTPAQ15257 358 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 RHPN2Q8IUC4 686 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 DEFB123Q8N688 67 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 USP38Q8NB14 1042 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 UBXN4Q92575 508 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 SEMA6BQ9H3T3 888 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 ST3GAL5Q9UNP4 418 aa10.37□□□□□ -0.75
BRCA1-219ENST00000491747 TTC3P53804 2025 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 A0A087WZ62 844 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 LCHNA4D1U4 455 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 RPS6KA5O75582 802 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 RFC5P40937 340 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 NFX1Q12986 1120 aaKnown RBP10.36□□□□□ -0.75
BRCA1-219ENST00000491747 PAK2Q13177 524 aa10.36□□□□□ -0.75
BRCA1-219ENST00000491747 ARHGAP29Q52LW3 1261 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms