RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 XKR3Q5GH77 459 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 HFE2Q6ZVN8 426 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 BRAPQ7Z569 592 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 RNF135Q8IUD6 432 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 LRRC43Q8N309 656 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 RDM1Q8NG50 284 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 HELQQ8TDG4 1101 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 MICAL1Q8TDZ2 1067 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 FAM20AQ96MK3 541 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 FDXACB1Q9BRP7 624 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 KCNMB3Q9NPA1 279 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 AAASQ9NRG9 546 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 CDH22Q9UJ99 828 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 USP15Q9Y4E8 981 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 DENND4AQ7Z401 1863 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 CFAP54Q96N23 3096 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 FSD2A1L4K1 749 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 DDX11L8A8MPP1 907 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 TBX3O15119 743 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 ZSCAN20P17040 1043 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 ATP2B1P20020 1258 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 NPEPPSP55786 919 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 PLCB3Q01970 1234 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 ORC2Q13416 577 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 KCNC3Q14003 757 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 LONRF3Q496Y0 759 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 KCNT2Q6UVM3 1135 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 TMEM173Q86WV6 379 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 POTEDQ86YR6 584 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 SLC39A11Q8N1S5 342 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 MRPS27Q92552 414 aaKnown RBP12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 HAS1Q92839 578 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 LPPQ93052 612 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 MFSD14AQ96MC6 490 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 TCF25Q9BQ70 676 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 APOL5Q9BWW9 433 aa12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-211ENST00000491685 A0A0U1RQF3 1178 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 HOXA2O43364 376 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 B4GALT3O60512 393 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 MAFO75444 373 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 PSMC5P62195 406 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 CDC42EP1Q00587 391 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 PPP2R5CQ13362 524 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 LLGL2Q6P1M3 1020 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 BCL7CQ8WUZ0 217 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 TNFRSF25Q93038 417 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 NLRP4Q96MN2 994 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 ZNF558Q96NG5 402 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 ENTPD7Q9NQZ7 604 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 SUCLA2Q9P2R7 463 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 LZTS1Q9Y250 596 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 TDRD15B5MCY1 1934 aaKnown RBP12.3□□□□□ -0.44
TMEM39A-211ENST00000491685 PLXNA3P51805 1871 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 LOC730098B7Z3J9 87 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 WNT7AO00755 349 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 BMP15O95972 392 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 PHKA2P46019 1235 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 NUCB2P80303 420 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 SPIRE1Q08AE8 756 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 ZNF174Q15697 407 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 HERC4Q5GLZ8 1057 aaPredicted RBP12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 TTC38Q5R3I4 469 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 SYCE2Q6PIF2 218 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 ABI1Q8IZP0 508 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 FEZF2Q8TBJ5 459 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 RSPH1Q8WYR4 309 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 SUSD6Q92537 303 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 POP1Q99575 1024 aaKnown RBP12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 GCOM2Q9BZD3 368 aaPredicted RBP12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 CYP26B1Q9NR63 512 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 PCDHA12Q9UN75 941 aa12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 PIN4Q9Y237 131 aaKnown RBP12.29□□□□□ -0.44
TMEM39A-211ENST00000491685 CARNS1A5YM72 827 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 LAD1O00515 517 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 ZBTB39O15060 712 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 DKC1O60832 514 aaKnown RBP eCLIP12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 MCM7P33993 719 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 TECP42680 631 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 QARSP47897 775 aaKnown RBP12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 CALCRLQ16602 461 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 NCAPH2Q6IBW4 605 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 ANKRD54Q6NXT1 300 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 AUTS2Q8WXX7 1259 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 TMEM143Q96AN5 459 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 DYDC2Q96IM9 177 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 ZNF396Q96N95 335 aaPredicted RBP12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 PHOX2BQ99453 314 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 LXNQ9BS40 222 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 RAB34Q9BZG1 259 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 S1PR5Q9H228 398 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 MINDY3Q9H8M7 445 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 IFT122Q9HBG6 1241 aa12.28□□□□□ -0.44
TMEM39A-211ENST00000491685 FAM105AQ9NUU6 356 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms