RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 DHX32Q7L7V1 743 aaKnown RBP14.92□□□□□ -0.02
USF1-206ENST00000491629 ERMP1Q7Z2K6 904 aa14.92□□□□□ -0.02
USF1-206ENST00000491629 REXO1Q8N1G1 1221 aaKnown RBP14.92□□□□□ -0.02
USF1-206ENST00000491629 ZNF710Q8N1W2 664 aa14.92□□□□□ -0.02
USF1-206ENST00000491629 SLC5A5Q92911 643 aa14.92□□□□□ -0.02
USF1-206ENST00000491629 KLHL5Q96PQ7 755 aa14.92□□□□□ -0.02
USF1-206ENST00000491629 FDXACB1Q9BRP7 624 aaPredicted RBP14.92□□□□□ -0.02
USF1-206ENST00000491629 CHST12Q9NRB3 414 aa14.92□□□□□ -0.02
USF1-206ENST00000491629 NRBP2Q9NSY0 501 aa14.92□□□□□ -0.02
USF1-206ENST00000491629 DUSP12Q9UNI6 340 aa14.92□□□□□ -0.02
USF1-206ENST00000491629 COL4A3Q01955 1670 aa14.92□□□□□ -0.02
USF1-206ENST00000491629 EPG5Q9HCE0 2579 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 CACNA1BQ00975 2339 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 KRBA1A5PL33 1030 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 CHMP2AO43633 222 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 ZNF623O75123 536 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 TBC1D8BQ0IIM8 1120 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 TSGA10IPQ3SY00 556 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 NOMO2Q5JPE7 1267 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 B3GNT9Q6UX72 402 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 AGMOQ6ZNB7 445 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 CABP7Q86V35 215 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 KSR1Q8IVT5 923 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 SIX5Q8N196 739 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 DTWD2Q8NBA8 298 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 RSAD2Q8WXG1 361 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 SCLT1Q96NL6 688 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 NIFKQ9BYG3 293 aaKnown RBP14.91□□□□□ -0.02
USF1-206ENST00000491629 GBP3Q9H0R5 595 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 SFXN1Q9H9B4 322 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 FAM105AQ9NUU6 356 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 INPP5FQ9Y2H2 1132 aa14.91□□□□□ -0.02
USF1-206ENST00000491629 TPRP12270 2363 aaKnown RBP14.9□□□□□ -0.02
USF1-206ENST00000491629 PATJQ8NI35 1801 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 PSMD10O75832 226 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 SSBP05455 408 aaKnown RBP eCLIP14.9□□□□□ -0.02
USF1-206ENST00000491629 GIT2Q14161 759 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 MTERF2Q49AM1 385 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 TWF2Q6IBS0 349 aaKnown RBP14.9□□□□□ -0.02
USF1-206ENST00000491629 POTEGQ6S5H5 508 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 CCDC149Q6ZUS6 474 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 TAS1R1Q7RTX1 841 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 SKAP1Q86WV1 359 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 GCOM2Q9BZD3 368 aaPredicted RBP14.9□□□□□ -0.02
USF1-206ENST00000491629 C6orf50Q9HD87 102 aa14.9□□□□□ -0.02
USF1-206ENST00000491629 PIN4Q9Y237 131 aaKnown RBP14.9□□□□□ -0.02
USF1-206ENST00000491629 KMT2BQ9UMN6 2715 aaPredicted RBP14.9□□□□□ -0.02
USF1-206ENST00000491629 NID2Q14112 1375 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 NOTCH4Q99466 2003 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 PRPF3O43395 683 aaKnown RBP14.89□□□□□ -0.03
USF1-206ENST00000491629 EFEMP2O95967 443 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 RCAN1P53805 252 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 NTRK3Q16288 839 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 LETM2Q2VYF4 491 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 GLB1LQ6UWU2 654 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 OTOP3Q7RTS5 596 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 PHKBQ93100 1093 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 ACSF2Q96CM8 615 aaPredicted RBP14.89□□□□□ -0.03
USF1-206ENST00000491629 CCDC136Q96JN2 1154 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 YTHDC1Q96MU7 727 aaKnown RBP14.89□□□□□ -0.03
USF1-206ENST00000491629 RIT2Q99578 217 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 IFT122Q9HBG6 1241 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 TCEAL9Q9UHQ7 104 aa14.89□□□□□ -0.03
USF1-206ENST00000491629 GAS7O60861 476 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 MAFO75444 373 aaPredicted RBP14.88□□□□□ -0.03
USF1-206ENST00000491629 KLRC2P26717 231 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 IRX6P78412 446 aaPredicted RBP14.88□□□□□ -0.03
USF1-206ENST00000491629 BMS1Q14692 1282 aaKnown RBP14.88□□□□□ -0.03
USF1-206ENST00000491629 UBXN11Q5T124 520 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 C15orf39Q6ZRI6 1047 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 MRPL10Q7Z7H8 261 aaKnown RBP14.88□□□□□ -0.03
USF1-206ENST00000491629 PPFIBP1Q86W92 1011 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 RHPN2Q8IUC4 686 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
USF1-206ENST00000491629 RMDN1Q96DB5 314 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 MYADMQ96S97 322 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 RTP3Q9BQQ7 232 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 MINDY3Q9H8M7 445 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 MARCH5Q9NX47 278 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 SEPT9Q9UHD8 586 aaPredicted RBP14.88□□□□□ -0.03
USF1-206ENST00000491629 PCDHB2Q9Y5E7 798 aa14.88□□□□□ -0.03
USF1-206ENST00000491629 MED19A0JLT2 244 aaPredicted RBP14.87□□□□□ -0.03
USF1-206ENST00000491629 F8W810 466 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 CFHP08603 1231 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 MYBP10242 640 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 SFPQP23246 707 aaKnown RBP eCLIP14.87□□□□□ -0.03
USF1-206ENST00000491629 HOXA11P31270 313 aaPredicted RBP14.87□□□□□ -0.03
USF1-206ENST00000491629 SFNP31947 248 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 JAK3P52333 1124 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 RNASELQ05823 741 aaKnown RBP14.87□□□□□ -0.03
USF1-206ENST00000491629 XKR3Q5GH77 459 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 LRCH2Q5VUJ6 765 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 ANO5Q75V66 913 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 CATSPER4Q7RTX7 472 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 ZNF410Q86VK4 478 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 TMEM87AQ8NBN3 555 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 CMASQ8NFW8 434 aaPredicted RBP14.87□□□□□ -0.03
USF1-206ENST00000491629 RSPH1Q8WYR4 309 aa14.87□□□□□ -0.03
USF1-206ENST00000491629 ZNF707Q96C28 371 aaPredicted RBP14.87□□□□□ -0.03
USF1-206ENST00000491629 MAN1C1Q9NR34 630 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms