RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 THBS2P35442 1172 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 DDIT3P35638 169 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ID4P47928 161 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 FNTBP49356 437 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 FOXO4P98177 505 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 DBPQ10586 325 aaPredicted RBP5.59□□□□□ -1.51
RTN4-215ENST00000491592 PDE1CQ14123 709 aaPredicted RBP5.59□□□□□ -1.51
RTN4-215ENST00000491592 STAT4Q14765 748 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 SLC4A8Q2Y0W8 1093 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ANO1Q5XXA6 986 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 CIAPIN1Q6FI81 312 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ESRP1Q6NXG1 681 aaKnown RBP5.59□□□□□ -1.51
RTN4-215ENST00000491592 ANKRD23Q86SG2 305 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ZNF354CQ86Y25 554 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 SPICE1Q8N0Z3 855 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ANKRD42Q8N9B4 389 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 DTX3Q8N9I9 347 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ASB15Q8WXK1 588 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 RSPH1Q8WYR4 309 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ZSWIM3Q96MP5 696 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 TMEM209Q96SK2 561 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ELF4Q99607 663 aaPredicted RBP5.59□□□□□ -1.51
RTN4-215ENST00000491592 SYT3Q9BQG1 590 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 GORASP1Q9BQQ3 440 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 PTPRHQ9HD43 1115 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ACSS2Q9NR19 701 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 TOMM22Q9NS69 142 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 BTBD7Q9P203 1132 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ARHGAP28Q9P2N2 729 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 RCAN3Q9UKA8 241 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 ACAD8Q9UKU7 415 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 HDAC9Q9UKV0 1011 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 WASF3Q9UPY6 502 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 SH3BP1Q9Y3L3 701 aa5.59□□□□□ -1.51
RTN4-215ENST00000491592 KIF15Q9NS87 1388 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 E2F8A0AVK6 867 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 FIBPO43427 364 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 TGM5O43548 720 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 ZEB2O60315 1214 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 NBPF7P0C2Y1 421 aaPredicted RBP5.58□□□□□ -1.52
RTN4-215ENST00000491592 PTGS1P23219 599 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 PTX3P26022 381 aaPredicted RBP5.58□□□□□ -1.52
RTN4-215ENST00000491592 MMP14P50281 582 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 TMPRSS15P98073 1019 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 PURAQ00577 322 aaKnown RBP5.58□□□□□ -1.52
RTN4-215ENST00000491592 MCL1Q07820 350 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 ADAM9Q13443 819 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 PICALMQ13492 652 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 LRRC41Q15345 812 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 KCNA10Q16322 511 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 ATP13A4Q4VNC1 1196 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 LHFPL2Q6ZUX7 228 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 RPAINQ86UA6 219 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 DDX42Q86XP3 938 aaKnown RBP eCLIP5.58□□□□□ -1.52
RTN4-215ENST00000491592 FAM129CQ86XR2 697 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 CHCHD4Q8N4Q1 142 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 HIPK4Q8NE63 616 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 VPS37AQ8NEZ2 397 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 SKA1Q96BD8 255 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 SCLT1Q96NL6 688 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 NOX5Q96PH1 765 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 HERPUD2Q9BSE4 406 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 C11orf84Q9BUA3 381 aaPredicted RBP5.58□□□□□ -1.52
RTN4-215ENST00000491592 CSRNP2Q9H175 543 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 ALDH8A1Q9H2A2 487 aaPredicted RBP5.58□□□□□ -1.52
RTN4-215ENST00000491592 SLC39A2Q9NP94 309 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 DLL4Q9NR61 685 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 ASB1Q9Y576 335 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 PMF1-BGLAPU3KQ54 211 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 DENND4BO75064 1496 aaPredicted RBP5.58□□□□□ -1.52
RTN4-215ENST00000491592 GRIN2BQ13224 1484 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 TEX14Q8IWB6 1497 aa5.58□□□□□ -1.52
RTN4-215ENST00000491592 A0A1W2PRQ8 180 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 RFXAPO00287 272 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 ORC4O43929 436 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 CYP17A1P05093 508 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 RRM1P23921 792 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 PEX19P40855 299 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 LINC00310P59036 64 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 HTRA3P83110 453 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 PUM3Q15397 648 aaKnown RBP5.57□□□□□ -1.52
RTN4-215ENST00000491592 LONRF1Q17RB8 773 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 SKIDA1Q1XH10 827 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 GFOD2Q3B7J2 385 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 FAM83BQ5T0W9 1011 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 C1QTNF12Q5T7M4 302 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 ERAP2Q6P179 960 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 STK32CQ86UX6 486 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 SPATS2Q86XZ4 545 aaKnown RBP5.57□□□□□ -1.52
RTN4-215ENST00000491592 PASD1Q8IV76 773 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 SUGP1Q8IWZ8 645 aaKnown RBP5.57□□□□□ -1.52
RTN4-215ENST00000491592 LINC00482Q8N8I6 264 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 LSM14AQ8ND56 463 aaKnown RBP5.57□□□□□ -1.52
RTN4-215ENST00000491592 EXOC6Q8TAG9 804 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 ANP32BQ92688 251 aaKnown RBP5.57□□□□□ -1.52
RTN4-215ENST00000491592 GOLGA1Q92805 767 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 SLC5A5Q92911 643 aa5.57□□□□□ -1.52
RTN4-215ENST00000491592 ZBTB8AQ96BR9 441 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms