RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NCBP1Q09161 790 aaKnown RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 CBX2Q14781 532 aaPredicted RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 GLB1LQ6UWU2 654 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 BMP8AQ7Z5Y6 402 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 SRGAP1Q7Z6B7 1085 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 ZNF598Q86UK7 904 aaKnown RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 RHPN2Q8IUC4 686 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 C4orf19Q8IY42 314 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 DIS3L2Q8IYB7 885 aaKnown RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 FAM184AQ8NB25 1140 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 RNF169Q8NCN4 708 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 PSPC1Q8WXF1 523 aaKnown RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 EDAQ92838 391 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 TNFRSF25Q93038 417 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 C8orf76Q96K31 380 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 NECTIN4Q96NY8 510 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 KCNMB3Q9NPA1 279 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 CYP26B1Q9NR63 512 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 KANSL3Q9P2N6 904 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 RAPGEFL1Q9UHV5 662 aa11.58□□□□□ -0.56
TTC28-207ENST00000490475 BARX2Q9UMQ3 279 aaPredicted RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.56
TTC28-207ENST00000490475 A0A087WZ62 844 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 CCNT1O60563 726 aaKnown RBP11.57□□□□□ -0.56
TTC28-207ENST00000490475 GLP2RO95838 553 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
TTC28-207ENST00000490475 PHKA2P46019 1235 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 ERVFC1P60507 584 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 EPHA7Q15375 998 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 PLPP4Q5VZY2 271 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 CES5AQ6NT32 575 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 CATSPER4Q7RTX7 472 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 SLC39A11Q8N1S5 342 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 CNNM3Q8NE01 707 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 FBXO18Q8NFZ0 1043 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 SUSD6Q92537 303 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 CEP170P1Q96L14 293 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 CEP89Q96ST8 783 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 FDXACB1Q9BRP7 624 aaPredicted RBP11.57□□□□□ -0.56
TTC28-207ENST00000490475 ZSWIM4Q9H7M6 989 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 UBN1Q9NPG3 1134 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 PIN4Q9Y237 131 aaKnown RBP11.57□□□□□ -0.56
TTC28-207ENST00000490475 NR2E1Q9Y466 385 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 IRAK3Q9Y616 596 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 CNTNAP2Q9UHC6 1331 aa11.57□□□□□ -0.56
TTC28-207ENST00000490475 PER2O15055 1255 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 STBD1O95210 358 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 AXLP30530 894 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 TECP42680 631 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 RNASELQ05823 741 aaKnown RBP11.56□□□□□ -0.56
TTC28-207ENST00000490475 KCNC3Q14003 757 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 MXD4Q14582 209 aaPredicted RBP11.56□□□□□ -0.56
TTC28-207ENST00000490475 CLLU1OSQ5K130 101 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 ANKRD54Q6NXT1 300 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 LRRC55Q6ZSA7 311 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 ANO5Q75V66 913 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 PPFIBP1Q86W92 1011 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 MRPL43Q8N983 215 aaKnown RBP11.56□□□□□ -0.56
TTC28-207ENST00000490475 URGCPQ8TCY9 931 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 HELQQ8TDG4 1101 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 NLRP4Q96MN2 994 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 DHX33Q9H6R0 707 aaKnown RBP11.56□□□□□ -0.56
TTC28-207ENST00000490475 FAM105AQ9NUU6 356 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 RNF19AQ9NV58 838 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 DZANK1Q9NVP4 752 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 MUTYHQ9UIF7 546 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 COL4A3BPQ9Y5P4 624 aa11.56□□□□□ -0.56
TTC28-207ENST00000490475 ZNF318Q5VUA4 2279 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 RBAK-RBAKDNI3L0D1 243 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 SLC37A4O43826 429 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 ATP2B1P20020 1258 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 GJB2P29033 226 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 MTHFRP42898 656 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 BCAR1P56945 870 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 POU5F1BQ06416 359 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 TFDP1Q14186 410 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 SAFBQ15424 915 aaKnown RBP eCLIP11.55□□□□□ -0.56
TTC28-207ENST00000490475 NOMO2Q5JPE7 1267 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 ELMSAN1Q6PJG2 1045 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 DDX53Q86TM3 631 aaKnown RBP11.55□□□□□ -0.56
TTC28-207ENST00000490475 SUGP1Q8IWZ8 645 aaKnown RBP11.55□□□□□ -0.56
TTC28-207ENST00000490475 HACE1Q8IYU2 909 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 CCDC51Q96ER9 411 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 RIPOR3Q96MK2 946 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 LXNQ9BS40 222 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 IRF2BPLQ9H1B7 796 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 AGPAT5Q9NUQ2 364 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 DPP7Q9UHL4 492 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 VAV3Q9UKW4 847 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 C5orf42Q9H799 3197 aa11.55□□□□□ -0.56
TTC28-207ENST00000490475 TECTAO75443 2155 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 C2orf71A6NGG8 1288 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 WNT7AO00755 349 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 ZC3H11AO75152 810 aaKnown RBP eCLIP11.54□□□□□ -0.56
TTC28-207ENST00000490475 ERLIN2O94905 339 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 FGFR4P22455 802 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 YWHABP31946 246 aaKnown RBP11.54□□□□□ -0.56
TTC28-207ENST00000490475 ZXDAP98168 799 aa11.54□□□□□ -0.56
TTC28-207ENST00000490475 SIGLEC14Q08ET2 396 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms