RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 NCK2O43639 380 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 KIF4AO95239 1232 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 TMEM253P0C7T8 217 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 EIF2AK2P19525 551 aaKnown RBP16.24■□□□□ 0.19
COL9A1-208ENST00000489611 VAMP7P51809 220 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 COG2Q14746 738 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 KIF22Q14807 665 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 ZNF280CQ8ND82 737 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 KIFAP3Q92845 792 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 ATP6V0A1Q93050 837 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 PKNOX2Q96KN3 472 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 PACSIN1Q9BY11 444 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 BCAS3Q9H6U6 928 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 SUGCTQ9HAC7 445 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 POLD4Q9HCU8 107 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
COL9A1-208ENST00000489611 MYPNQ86TC9 1320 aa16.24■□□□□ 0.19
COL9A1-208ENST00000489611 H0YCG3 227 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 USP2O75604 605 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 FTCDO95954 541 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 PTPRAP18433 802 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 CBWD6Q4V339 395 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 CBWD3Q5JTY5 395 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 CBWD5Q5RIA9 395 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 VSIG10LQ86VR7 867 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 USP38Q8NB14 1042 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 TPCN2Q8NHX9 752 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 NSUN6Q8TEA1 469 aaKnown RBP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 ADAMTS5Q9UNA0 930 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 PCDHA10Q9Y5I2 948 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 NCANO14594 1321 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 PHIPQ8WWQ0 1821 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 CCDC188H7C350 402 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 DDX3XO00571 662 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 RTP1P59025 263 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 SPP2Q13103 211 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 ALS2CLQ60I27 953 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 SPIRE2Q8WWL2 714 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 CTNNBL1Q8WYA6 563 aaPredicted RBP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 RFFLQ8WZ73 363 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 NTPCRQ9BSD7 190 aaKnown RBP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 SYT11Q9BT88 431 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 MOV10L1Q9BXT6 1211 aaKnown RBP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 ZCCHC17Q9NP64 241 aaKnown RBP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 HOMER2Q9NSB8 354 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 RBM12Q9NTZ6 932 aaKnown RBP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 VPS18Q9P253 973 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 POLR2AP24928 1970 aaKnown RBP16.23■□□□□ 0.19
COL9A1-208ENST00000489611 NFASCO94856 1347 aa16.23■□□□□ 0.19
COL9A1-208ENST00000489611 MYCLP12524 364 aaPredicted RBP16.22■□□□□ 0.19
COL9A1-208ENST00000489611 HADHBP55084 474 aaKnown RBP16.22■□□□□ 0.19
COL9A1-208ENST00000489611 PAK2Q13177 524 aa16.22■□□□□ 0.19
COL9A1-208ENST00000489611 PPP2R5EQ16537 467 aa16.22■□□□□ 0.19
COL9A1-208ENST00000489611 PEX26Q7Z412 305 aa16.22■□□□□ 0.19
COL9A1-208ENST00000489611 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.22■□□□□ 0.19
COL9A1-208ENST00000489611 PSMB7Q99436 277 aa16.22■□□□□ 0.19
COL9A1-208ENST00000489611 GDF3Q9NR23 364 aa16.22■□□□□ 0.19
COL9A1-208ENST00000489611 HSPBP1Q9NZL4 362 aa16.22■□□□□ 0.19
COL9A1-208ENST00000489611 DMGDHQ9UI17 866 aaKnown RBP16.22■□□□□ 0.19
COL9A1-208ENST00000489611 TMEM59LQ9UK28 342 aa16.22■□□□□ 0.19
COL9A1-208ENST00000489611 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 PFASO15067 1338 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 POTEJP0CG39 1038 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 DMP1Q13316 513 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 TCEAL1Q15170 157 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 XKR9Q5GH70 373 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 NSMFQ6X4W1 530 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 GPIHBP1Q8IV16 184 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 KSR1Q8IVT5 923 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 RHOT2Q8IXI1 618 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 LMO3Q8TAP4 145 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 U2AF1L4Q8WU68 220 aaKnown RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 ZC3H15Q8WU90 426 aaKnown RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 ZFP91Q96JP5 570 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 FAM81BQ96LP2 452 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 PKD2L1Q9P0L9 805 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 TESPA1A2RU30 521 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 ANKRD62A6NC57 917 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 GOLGA6BA6NDN3 693 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 PGRMC1O00264 195 aaKnown RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 KCNK3O14649 394 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 OPA1O60313 960 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 NR3C2P08235 984 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 TRIM49P0CI25 452 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 TRIM49CP0CI26 452 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 TNFAIP3P21580 790 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 GTF2H1P32780 548 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 DSG3P32926 999 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 MATR3P43243 847 aaKnown RBP eCLIP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 GNPTABQ3T906 1256 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 EPC2Q52LR7 807 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 MAP4K3Q8IVH8 894 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 MCPH1Q8NEM0 835 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 CDCA5Q96FF9 252 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 NAP1L3Q99457 506 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 GPR88Q9GZN0 384 aa16.21■□□□□ 0.19
COL9A1-208ENST00000489611 AJAP1Q9UKB5 411 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 TTC7AQ9ULT0 858 aaPredicted RBP16.21■□□□□ 0.19
COL9A1-208ENST00000489611 EMSYQ7Z589 1322 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms