RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ZSCAN10Q96SZ4 725 aaPredicted RBP17.21■□□□□ 0.35
UFD1-209ENST00000489406 NT5C3AQ9H0P0 336 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 RNF41Q9H4P4 317 aaPredicted RBP17.21■□□□□ 0.35
UFD1-209ENST00000489406 JPH1Q9HDC5 661 aaPredicted RBP17.21■□□□□ 0.35
UFD1-209ENST00000489406 ZBTB40Q9NUA8 1239 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 ZFP37Q9Y6Q3 630 aaPredicted RBP17.21■□□□□ 0.35
UFD1-209ENST00000489406 CARNS1A5YM72 827 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 CYSRT1A8MQ03 144 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 GIPC1O14908 333 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 TEX28O15482 410 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 ADH1AP07327 375 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 MTMR1Q13613 665 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 LONRF3Q496Y0 759 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 ZNF852Q6ZMS4 543 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 FAM160A2Q8N612 972 aaPredicted RBP17.2■□□□□ 0.34
UFD1-209ENST00000489406 TBC1D13Q9NVG8 400 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 SLC9A2Q9UBY0 812 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 IGSF10Q6WRI0 2623 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 EVPLQ92817 2033 aa17.2■□□□□ 0.34
UFD1-209ENST00000489406 CHURC1-FNTBB4DL54 471 aa17.19■□□□□ 0.34
UFD1-209ENST00000489406 FSHRP23945 695 aa17.19■□□□□ 0.34
UFD1-209ENST00000489406 FNTBP49356 437 aa17.19■□□□□ 0.34
UFD1-209ENST00000489406 NOVA1P51513 510 aaKnown RBP17.19■□□□□ 0.34
UFD1-209ENST00000489406 ACTR2P61160 394 aa17.19■□□□□ 0.34
UFD1-209ENST00000489406 RNASELQ05823 741 aaKnown RBP17.19■□□□□ 0.34
UFD1-209ENST00000489406 KXD1Q9BQD3 176 aa17.19■□□□□ 0.34
UFD1-209ENST00000489406 CHRDQ9H2X0 955 aa17.19■□□□□ 0.34
UFD1-209ENST00000489406 NDRG2Q9UN36 371 aaKnown RBP17.19■□□□□ 0.34
UFD1-209ENST00000489406 INPP5FQ9Y2H2 1132 aa17.19■□□□□ 0.34
UFD1-209ENST00000489406 MRPS17Q9Y2R5 130 aaKnown RBP17.19■□□□□ 0.34
UFD1-209ENST00000489406 AXIN1O15169 862 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 HBP1O60381 514 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 B4GALT3O60512 393 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 ZNF252P-AS1Q0IIN9 211 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 MTSS1LQ765P7 747 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 METTL13Q8N6R0 699 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 LPPQ93052 612 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 RPS6KC1Q96S38 1066 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 SCNM1Q9BWG6 230 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 PRKD2Q9BZL6 878 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 ARRDC1-AS1Q9H2J1 176 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 HEBP1Q9NRV9 189 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 CDH7Q9ULB5 785 aa17.18■□□□□ 0.34
UFD1-209ENST00000489406 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 URODP06132 367 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 CCR3P51677 355 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 NLRP11P59045 1033 aaKnown RBP17.17■□□□□ 0.34
UFD1-209ENST00000489406 NOMO2Q5JPE7 1267 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 MAMSTRQ6ZN01 415 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 CEP68Q76N32 757 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 PALB2Q86YC2 1186 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 ZNF280BQ86YH2 543 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 CUL5Q93034 780 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 ZNF668Q96K58 619 aaPredicted RBP17.17■□□□□ 0.34
UFD1-209ENST00000489406 PHF20Q9BVI0 1012 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 RIOX1Q9H6W3 641 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 HELLSQ9NRZ9 838 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 ANKFY1Q9P2R3 1169 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 STK39Q9UEW8 545 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 UBIAD1Q9Y5Z9 338 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 BPTFQ12830 3046 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 LOC400499M0QZD8 3231 aa17.17■□□□□ 0.34
UFD1-209ENST00000489406 BAZ2BQ9UIF8 2168 aaKnown RBP17.16■□□□□ 0.34
UFD1-209ENST00000489406 PALM3A6NDB9 673 aaPredicted RBP17.16■□□□□ 0.34
UFD1-209ENST00000489406 SHISA7A6NL88 538 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 B4E1Z4 1266 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 PAPLNO95428 1278 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 ZNF806P0C7X5 589 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 FGFR4P22455 802 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 SATB1Q01826 763 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 ZNF484Q5JVG2 852 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 C19orf48Q6RUI8 117 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 GLB1LQ6UWU2 654 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 HDAC7Q8WUI4 952 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 PIBF1Q8WXW3 757 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 ZDHHC7Q9NXF8 308 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 SDK1Q7Z5N4 2213 aa17.16■□□□□ 0.34
UFD1-209ENST00000489406 COL1A2P08123 1366 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 ZBTB42B2RXF5 422 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 MEIS2O14770 477 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
UFD1-209ENST00000489406 C22orf31O95567 290 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 EIF4BP23588 611 aaKnown RBP17.15■□□□□ 0.34
UFD1-209ENST00000489406 CNR2P34972 360 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 SLC26A2P50443 739 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 NTHL1P78549 312 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 HEATR6Q6AI08 1181 aaKnown RBP17.15■□□□□ 0.34
UFD1-209ENST00000489406 TAS1R1Q7RTX1 841 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 GRASPQ7Z6J2 395 aaPredicted RBP17.15■□□□□ 0.34
UFD1-209ENST00000489406 PDZD3Q86UT5 571 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 FGF13Q92913 245 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 PLEKHA4Q9H4M7 779 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 JADE2Q9NQC1 790 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 ZSWIM5Q9P217 1185 aa17.15■□□□□ 0.34
UFD1-209ENST00000489406 DDX19BQ9UMR2 479 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms