RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CHP1Q99653 195 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 ZNF577Q9BSK1 485 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 CARD6Q9BX69 1037 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 BHMT2Q9H2M3 363 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 PARVGQ9HBI0 331 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 AGPAT5Q9NUQ2 364 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 AIPL1Q9NZN9 384 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 BTBD7Q9P203 1132 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 ARMCX3Q9UH62 379 aaPredicted RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 DDX41Q9UJV9 622 aaKnown RBP9.27□□□□□ -0.93
VTI1A-207ENST00000489357 GJD2Q9UKL4 321 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 PPP1R9AQ9ULJ8 1098 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 ZNF536O15090 1300 aa9.27□□□□□ -0.93
VTI1A-207ENST00000489357 CCDC85CA6NKD9 419 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 ATP2A1O14983 1001 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 PEX10O60683 326 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 DKC1O60832 514 aaKnown RBP eCLIP9.26□□□□□ -0.93
VTI1A-207ENST00000489357 ZBED4O75132 1171 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 GFPT2O94808 682 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 FAM13AO94988 1023 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 F12P00748 615 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-207ENST00000489357 IGHA2P01877 340 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 EPB41P11171 864 aaKnown RBP9.26□□□□□ -0.93
VTI1A-207ENST00000489357 XRCC5P13010 732 aaKnown RBP9.26□□□□□ -0.93
VTI1A-207ENST00000489357 RFX1P22670 979 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 SFNP31947 248 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 CTHP32929 405 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 STAT3P40763 770 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 JAK3P52333 1124 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 PRMT2P55345 433 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 CHMP4BP1P59074 171 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 IRX3P78415 501 aaPredicted RBP9.26□□□□□ -0.93
VTI1A-207ENST00000489357 AMPD2Q01433 879 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 BRD3Q15059 726 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 PPP2R5AQ15172 486 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 ERCC6LQ2NKX8 1250 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 TKFCQ3LXA3 575 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 RINT1Q6NUQ1 792 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 PDXDC1Q6P996 788 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 HS2ST1Q7LGA3 356 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 SFR1Q86XK3 245 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 SLC9A9Q8IVB4 645 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 ANKRD13CQ8N6S4 541 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 ACRBPQ8NEB7 543 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 USP6NLQ92738 828 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 HPS3Q969F9 1004 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 IWS1Q96ST2 819 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 IFIH1Q9BYX4 1025 aaKnown RBP9.26□□□□□ -0.93
VTI1A-207ENST00000489357 ARHGAP39Q9C0H5 1083 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 GBP3Q9H0R5 595 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 ST6GALNAC4Q9H4F1 302 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 ZSWIM4Q9H7M6 989 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 MMRN2Q9H8L6 949 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 FBXO28Q9NVF7 368 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 LARSQ9P2J5 1176 aaKnown RBP9.26□□□□□ -0.93
VTI1A-207ENST00000489357 TCEAL9Q9UHQ7 104 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 KCNG1Q9UIX4 513 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 REXO2Q9Y3B8 237 aaKnown RBP9.26□□□□□ -0.93
VTI1A-207ENST00000489357 JRKLQ9Y4A0 524 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 UBIAD1Q9Y5Z9 338 aa9.26□□□□□ -0.93
VTI1A-207ENST00000489357 CTAGE15A4D2H0 777 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 BTNL10A8MVZ5 291 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 EML1O00423 815 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 VWA5AO00534 786 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 MAPK13O15264 365 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 TACC1O75410 805 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 ERLIN1O75477 346 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 AFPP02771 609 aaKnown RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 P4HBP07237 508 aaKnown RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 CTAGE8P0CG41 777 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 KIF11P52732 1056 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 MCCD1P59942 119 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 SNAP25P60880 206 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 ERVK-9P63128 1117 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 KRT76Q01546 638 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 ENPEPQ07075 957 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 LRRC41Q15345 812 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 ASTE1Q2TB18 679 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 SFMBT2Q5VUG0 894 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 CCDC174Q6PII3 467 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 FBXO38Q6PIJ6 1188 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 TMCO3Q6UWJ1 677 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 TRAPPC11Q7Z392 1133 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 CTAGE6Q86UF2 777 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 CTAGE4Q8IX94 777 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 C12orf56Q8IXR9 622 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 SLC35F6Q8N357 371 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 MSANTD4Q8NCY6 345 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 GPRC5AQ8NFJ5 357 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 SMCR8Q8TEV9 937 aaPredicted RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 CLEC4DQ8WXI8 215 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 SECISBP2LQ93073 1101 aaKnown RBP9.25□□□□□ -0.93
VTI1A-207ENST00000489357 HVCN1Q96D96 273 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 ATG4CQ96DT6 458 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 CDHR1Q96JP9 859 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 ALS2CR12Q96Q35 445 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 SENP7Q9BQF6 1050 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 TANGO6Q9C0B7 1094 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 DEF6Q9H4E7 631 aa9.25□□□□□ -0.93
VTI1A-207ENST00000489357 TMEM206Q9H813 350 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms