RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SCLT1Q96NL6 688 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 UPF3AQ9H1J1 476 aaKnown RBP10.98□□□□□ -0.65
USP11-211ENST00000489111 METTL14Q9HCE5 456 aaKnown RBP10.98□□□□□ -0.65
USP11-211ENST00000489111 XPNPEP3Q9NQH7 507 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 INTS13Q9NVM9 706 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 IMPACTQ9P2X3 320 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 ARMCX3Q9UH62 379 aaPredicted RBP10.98□□□□□ -0.65
USP11-211ENST00000489111 AKT3Q9Y243 479 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 ADGRA3Q8IWK6 1321 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 NRCAMQ92823 1304 aa10.98□□□□□ -0.65
USP11-211ENST00000489111 LOXHD1Q8IVV2 1947 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 K7ERI5 159 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 ASAP2O43150 1006 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 EXOC3O60645 756 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 PGK1P00558 417 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 MYCNP04198 464 aaPredicted RBP10.97□□□□□ -0.65
USP11-211ENST00000489111 TPM1P09493 284 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 SRGAP2CP0DJJ0 459 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 CCND3P30281 292 aaPredicted RBP10.97□□□□□ -0.65
USP11-211ENST00000489111 PSMC2P35998 433 aaKnown RBP10.97□□□□□ -0.65
USP11-211ENST00000489111 PHKA2P46019 1235 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 LIG4P49917 911 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 PURAQ00577 322 aaKnown RBP10.97□□□□□ -0.65
USP11-211ENST00000489111 PPP2R3AQ06190 1150 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 DRP2Q13474 957 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 MYBPC2Q14324 1141 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 NR1I3Q14994 352 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 HS1BP3Q53T59 392 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 MTHFD1LQ6UB35 978 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 FRMD5Q7Z6J6 570 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 PPFIBP1Q86W92 1011 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 SLC9A9Q8IVB4 645 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 C12orf56Q8IXR9 622 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 FAM186BQ8IYM0 893 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 C7orf31Q8N865 590 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 RNF149Q8NC42 400 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 LMBR1Q8WVP7 490 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 KAT2BQ92831 832 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 MTG1Q9BT17 334 aaPredicted RBP10.97□□□□□ -0.65
USP11-211ENST00000489111 MKNK1Q9BUB5 465 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 IKZF4Q9H2S9 585 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 SETD4Q9NVD3 440 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 TSKSQ9UJT2 592 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 TRIM17Q9Y577 477 aa10.97□□□□□ -0.65
USP11-211ENST00000489111 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP11-211ENST00000489111 MYADML2A6NDP7 307 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 TEX33O43247 280 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 MSCO60682 206 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 AKAP3O75969 853 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 INHAP05111 366 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 GNAT1P11488 350 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 KRT13P13646 458 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 GRK4P32298 578 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 MARSP56192 900 aaKnown RBP10.96□□□□□ -0.65
USP11-211ENST00000489111 IRX5P78411 483 aaPredicted RBP10.96□□□□□ -0.65
USP11-211ENST00000489111 MKRN4PQ13434 485 aaPredicted RBP10.96□□□□□ -0.65
USP11-211ENST00000489111 TRIM14Q14142 442 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 TMEM132AQ24JP5 1023 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 DCAF17Q5H9S7 520 aaPredicted RBP10.96□□□□□ -0.65
USP11-211ENST00000489111 MAP3K21Q5TCX8 1036 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 CDCA2Q69YH5 1023 aaPredicted RBP10.96□□□□□ -0.65
USP11-211ENST00000489111 NFRKBQ6P4R8 1299 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 CCDC186Q7Z3E2 898 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 TRIM59Q8IWR1 403 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 XXYLT1Q8NBI6 393 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 CCDC150Q8NCX0 1101 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 POMGNT1Q8WZA1 660 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 KCNN1Q92952 543 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 ZBTB10Q96DT7 871 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 PCMTD1Q96MG8 357 aaPredicted RBP10.96□□□□□ -0.65
USP11-211ENST00000489111 CBWD1Q9BRT8 395 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 NDST4Q9H3R1 872 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 HSPBP1Q9NZL4 362 aa10.96□□□□□ -0.65
USP11-211ENST00000489111 DDX20Q9UHI6 824 aaKnown RBP10.96□□□□□ -0.65
USP11-211ENST00000489111 MCM3APO60318 1980 aa10.96□□□□□ -0.66
USP11-211ENST00000489111 DOCK5Q9H7D0 1870 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 ZSWIM8A7E2V4 1837 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 ITIH6Q6UXX5 1313 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 A0A1W2PQC6 194 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 C17orf102A2RUQ5 167 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 TISP43B9A030 160 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 INO80B-WBP1J3KQ70 363 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 HAS3O00219 553 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 NRDCO43847 1150 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 PRKCBP05771 671 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 SFPQP23246 707 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP11-211ENST00000489111 MATR3P43243 847 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP11-211ENST00000489111 CASP4P49662 377 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 MAPK6Q16659 721 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 PTPN21Q16825 1174 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 MIIPQ5JXC2 388 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 TCERG1LQ5VWI1 586 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 CXCL17Q6UXB2 119 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 TAS1R3Q7RTX0 852 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 RNF180Q86T96 592 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 LINC01465Q8N7H1 131 aa10.95□□□□□ -0.66
USP11-211ENST00000489111 PCSK9Q8NBP7 692 aaKnown RBP10.95□□□□□ -0.66
USP11-211ENST00000489111 NLRP7Q8WX94 980 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms