RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZBTB39O15060 712 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 FGF18O76093 207 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 U2AF2P26368 475 aaKnown RBP eCLIP10.13□□□□□ -0.79
HDAC6-232ENST00000489053 RARRES1P49788 294 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 FAM189BP81408 668 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 UBE3AQ05086 875 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 PTGDRQ13258 359 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 PUS10Q3MIT2 529 aaKnown RBP10.13□□□□□ -0.79
HDAC6-232ENST00000489053 LONRF3Q496Y0 759 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 PADI6Q6TGC4 694 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 CATSPER3Q86XQ3 398 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 COLGALT1Q8NBJ5 622 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 POF1BQ8WVV4 589 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 CCDC51Q96ER9 411 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 IFT74Q96LB3 600 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 C2orf40Q9H1Z8 148 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 TLR9Q9NR96 1032 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 FAM105AQ9NUU6 356 aa10.13□□□□□ -0.79
HDAC6-232ENST00000489053 TNFRSF10AO00220 468 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 WNT7AO00755 349 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 ZC3H11AO75152 810 aaKnown RBP eCLIP10.12□□□□□ -0.79
HDAC6-232ENST00000489053 NR1I2O75469 434 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 ITGB1P05556 798 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 HSP90AA1P07900 732 aaKnown RBP10.12□□□□□ -0.79
HDAC6-232ENST00000489053 LIG1P18858 919 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 MUTP22033 750 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 RPA1P27694 616 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 AXLP30530 894 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 SSTR3P32745 418 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-232ENST00000489053 NDUFV1P49821 464 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.795e-6■■□□□ 12.9
HDAC6-232ENST00000489053 KCNQ1P51787 676 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 NBR1Q14596 966 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 PPP2R5AQ15172 486 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 PDE12Q6L8Q7 609 aaKnown RBP10.12□□□□□ -0.79
HDAC6-232ENST00000489053 KCNT2Q6UVM3 1135 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 APBB1IPQ7Z5R6 666 aaPredicted RBP10.12□□□□□ -0.79
HDAC6-232ENST00000489053 CNNM3Q8NE01 707 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 DEPTORQ8TB45 409 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 PABPC5Q96DU9 382 aaKnown RBP10.12□□□□□ -0.79
HDAC6-232ENST00000489053 TMEM169Q96HH4 297 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 CEP89Q96ST8 783 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 GBP3Q9H0R5 595 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 TLE6Q9H808 572 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 UBN1Q9NPG3 1134 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 AGPAT5Q9NUQ2 364 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 SPG21Q9NZD8 308 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 KANSL3Q9P2N6 904 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 DBR1Q9UK59 544 aaKnown RBP10.12□□□□□ -0.79
HDAC6-232ENST00000489053 KIAA1024Q9UPX6 916 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 DNM3Q9UQ16 869 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 PCDHB2Q9Y5E7 798 aa10.12□□□□□ -0.79
HDAC6-232ENST00000489053 CNTNAP2Q9UHC6 1331 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 A0A087WWV3 80 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 SPDYE4A6NLX3 237 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 H3BQ06 376 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-232ENST00000489053 MED24O75448 989 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 BMP15O95972 392 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 SSBP05455 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDAC6-232ENST00000489053 ITGA4P13612 1032 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 NRIP1P48552 1158 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 PTENP60484 403 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 PDIA5Q14554 519 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 NOMO2Q5JPE7 1267 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 PTCRAQ6ISU1 281 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-232ENST00000489053 TMC7Q7Z402 723 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 RBM23Q86U06 439 aaKnown RBP10.11□□□□□ -0.79
HDAC6-232ENST00000489053 CRIPAKQ8N1N5 446 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 SPPL3Q8TCT6 385 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 MRPS27Q92552 414 aaKnown RBP10.11□□□□□ -0.79
HDAC6-232ENST00000489053 KIFAP3Q92845 792 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 LPPQ93052 612 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 CASD1Q96PB1 797 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 APOL6Q9BWW8 343 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 RSAD1Q9HA92 442 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 IFT122Q9HBG6 1241 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 DDX19AQ9NUU7 478 aaKnown RBP10.11□□□□□ -0.79
HDAC6-232ENST00000489053 PRMT7Q9NVM4 692 aaPredicted RBP10.11□□□□□ -0.79
HDAC6-232ENST00000489053 PCDHB6Q9Y5E3 794 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 TTC3P53804 2025 aa10.11□□□□□ -0.79
HDAC6-232ENST00000489053 REV3LO60673 3130 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 COL4A4P53420 1690 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-232ENST00000489053 VWA3AA6NCI4 1184 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 CD2BP2O95400 341 aaKnown RBP10.1□□□□□ -0.79
HDAC6-232ENST00000489053 SPATA31C1P0DKV0 1188 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 ARL2P36404 184 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 PRPHP41219 470 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 POU5F1BQ06416 359 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 CAPSQ13938 189 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 CLUL1Q15846 466 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 MAPK6Q16659 721 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 LEXMQ3ZCV2 418 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 CLLU1OSQ5K130 101 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 PLPP4Q5VZY2 271 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 BRAPQ7Z569 592 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 ASAP3Q8TDY4 903 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 CPB2Q96IY4 423 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 RPS6KC1Q96S38 1066 aa10.1□□□□□ -0.79
HDAC6-232ENST00000489053 TCF25Q9BQ70 676 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms