RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 ACTRT1Q8TDG2 376 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 WNK4Q96J92 1243 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.212e-9■□□□□ 9
CLIC4-202ENST00000488683 SYT11Q9BT88 431 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 RAVER2Q9HCJ3 691 aaKnown RBP13.75□□□□□ -0.21
CLIC4-202ENST00000488683 FRMD4BQ9Y2L6 1034 aa13.75□□□□□ -0.21
CLIC4-202ENST00000488683 COL2A1P02458 1487 aaPredicted RBP13.74□□□□□ -0.21
CLIC4-202ENST00000488683 CES2O00748 559 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 ATP9AO75110 1047 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 FERP16591 822 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 CTNNA1P35221 906 aaKnown RBP13.74□□□□□ -0.21
CLIC4-202ENST00000488683 GOPCQ9HD26 462 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 KCNH7Q9NS40 1196 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 ATP8A1Q9Y2Q0 1164 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 NDUFAB1O14561 156 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 SGPL1O95470 568 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 NR1D1P20393 614 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 TNFAIP3P21580 790 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 MAP2K1Q02750 393 aaPredicted RBP13.74□□□□□ -0.21
CLIC4-202ENST00000488683 NFIL3Q16649 462 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 MREGQ8N565 214 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 DHX38Q92620 1227 aaKnown RBP13.74□□□□□ -0.21
CLIC4-202ENST00000488683 PBKQ96KB5 322 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 ZNF341Q9BYN7 854 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 STK33Q9BYT3 514 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 CNOT8Q9UFF9 292 aaKnown RBP13.74□□□□□ -0.21
CLIC4-202ENST00000488683 CCPG1Q9ULG6 757 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 FAM169AQ9Y6X4 670 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 COL4A5P29400 1685 aa13.74□□□□□ -0.21
CLIC4-202ENST00000488683 PPP1R37O75864 691 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 BFSP1Q12934 665 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 PRAMEF18Q5VWM3 479 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 LMBRD2Q68DH5 695 aaPredicted RBP13.73□□□□□ -0.21
CLIC4-202ENST00000488683 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 VPS36Q86VN1 386 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 ZDHHC14Q8IZN3 488 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 MDM1Q8TC05 714 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 C18orf8Q96DM3 657 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 NACC1Q96RE7 527 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 ISCUQ9H1K1 167 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 VCPKMTQ9H867 229 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 PTPN22Q9Y2R2 807 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 ZHX2Q9Y6X8 837 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 PSME4Q14997 1843 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 FOXO6A8MYZ6 492 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 DDX3YO15523 660 aaKnown RBP13.73□□□□□ -0.21
CLIC4-202ENST00000488683 SHBGP04278 402 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 KRT13P13646 458 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 PEX3P56589 373 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 MESDQ14696 234 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 DLGAP5Q15398 846 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 MIER3Q7Z3K6 550 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 LMO3Q8TAP4 145 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 HES6Q96HZ4 224 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 PCDHB18PQ96TA0 734 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 MKNK1Q9BUB5 465 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 STRA6Q9BX79 667 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 APEX2Q9UBZ4 518 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 AMFRQ9UKV5 643 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 SNX24Q9Y343 169 aa13.73□□□□□ -0.21
CLIC4-202ENST00000488683 ASTN2O75129 1339 aaPredicted RBP13.73□□□□□ -0.21
CLIC4-202ENST00000488683 A0A0A6YYK5 440 aaPredicted RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 MYO1FO00160 1098 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 LSP1P33241 339 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 ZNF844Q08AG5 666 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 IFI16Q16666 785 aaKnown RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 FBXW10Q5XX13 1052 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 SLC47A2Q86VL8 602 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 CBWD2Q8IUF1 395 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 RPUSD2Q8IZ73 545 aaKnown RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 CTNNBL1Q8WYA6 563 aaPredicted RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 SUCLA2Q9P2R7 463 aaPredicted RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 SYNPO2Q9UMS6 1093 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 BHMG1C9JSJ3 638 aaPredicted RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 ANKRD63C9JTQ0 380 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 PEX10O60683 326 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 ANXA13P27216 316 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 HSPA9P38646 679 aaKnown RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 KCNJ1P48048 391 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 CORO7P57737 925 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 MRPS9P82933 396 aaKnown RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 C1orf220Q5T0J3 134 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 RASGEF1CQ8N431 466 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 KCTD17Q8N5Z5 321 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 WHAMMQ8TF30 809 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 FAM151AQ8WW52 585 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 KAT2BQ92831 832 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 TAAR1Q96RJ0 339 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 FAM118BQ9BPY3 351 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 TEKT3Q9BXF9 490 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 TMOD2Q9NZR1 351 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 CTTNBP2NLQ9P2B4 639 aa13.72□□□□□ -0.21
CLIC4-202ENST00000488683 NOVA2Q9UNW9 492 aaKnown RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 MRPL11Q9Y3B7 192 aaKnown RBP13.72□□□□□ -0.21
CLIC4-202ENST00000488683 DNAH12Q6ZR08 3092 aa13.71□□□□□ -0.21
CLIC4-202ENST00000488683 E7EVH7 732 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms