RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SYNGAP1Q96PV0 1343 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 LAMA3Q16787 3333 aa6.89□□□□□ -1.31
CDHR3-213ENST00000488386 DHX15O43143 795 aaKnown RBP6.88□□□□□ -1.31
CDHR3-213ENST00000488386 SGSM2O43147 1006 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 DYNC1LI2O43237 492 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-213ENST00000488386 ASGR1P07306 291 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 CAPN2P17655 700 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 TFE3P19532 575 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-213ENST00000488386 ALDH5A1P51649 535 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-213ENST00000488386 EPHB4P54760 987 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 PSMC6P62333 389 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 RPS6P62753 249 aaKnown RBP6.88□□□□□ -1.31
CDHR3-213ENST00000488386 ID3Q02535 119 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 TNFAIP2Q03169 654 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 SNX17Q15036 470 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 SEC23AQ15436 765 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 SLC35G1Q2M3R5 365 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 QRICH1Q2TAL8 776 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 TKFCQ3LXA3 575 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 IFIT1BQ5T764 474 aaKnown RBP6.88□□□□□ -1.31
CDHR3-213ENST00000488386 CCSAPQ6IQ19 270 aaPredicted RBP6.88□□□□□ -1.31
CDHR3-213ENST00000488386 TAPT1Q6NXT6 567 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 AGMOQ6ZNB7 445 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 RNF207Q6ZRF8 634 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 TLK2Q86UE8 772 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 IQCA1Q86XH1 822 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 DGKHQ86XP1 1220 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 ADGRF4Q8IZF3 695 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 TDHQ8IZJ6 230 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 KLHDC9Q8NEP7 349 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 FBLIM1Q8WUP2 373 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 COPS5Q92905 334 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 TTC14Q96N46 770 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 FANCD2OSQ96PS1 177 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 UBAC1Q9BSL1 405 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 MYL10Q9BUA6 226 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 BACH2Q9BYV9 841 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 ABHD16BQ9H3Z7 469 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 STARD7Q9NQZ5 370 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 COL20A1Q9P218 1284 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 NRBP1Q9UHY1 535 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 RAXQ9Y2V3 346 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 SAMM50Q9Y512 469 aa6.88□□□□□ -1.31
CDHR3-213ENST00000488386 BAZ2BQ9UIF8 2168 aaKnown RBP6.88□□□□□ -1.31
CDHR3-213ENST00000488386 RAD50Q92878 1312 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 HMX2A2RU54 273 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 ASB14A6NK59 587 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 E7EWF7 191 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 K7ELQ4 463 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 PPP1R11O60927 126 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 ADAM23O75077 832 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 DUSP11O75319 330 aaKnown RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 CLTBP09497 229 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 PARP1P09874 1014 aaKnown RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 PCP11498 1178 aaKnown RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 RAB6AP20340 208 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 MAP4P27816 1152 aaKnown RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 BMP8BP34820 402 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 GJA9P57773 515 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 ANTXR2P58335 489 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 SHHQ15465 462 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 ZC3H12AQ5D1E8 599 aaKnown RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 CXCL17Q6UXB2 119 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 TICAM2Q86XR7 235 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 HOMER1Q86YM7 354 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 TRIM42Q8IWZ5 723 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 MSL3Q8N5Y2 521 aaKnown RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 PHC3Q8NDX5 983 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 MRRFQ96E11 262 aaKnown RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 TAAR1Q96RJ0 339 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 LBHD1Q9BQE6 289 aaPredicted RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 LRRC2Q9BYS8 371 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 KRT23Q9C075 422 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 KCNF1Q9H3M0 494 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 ACSS3Q9H6R3 686 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 JMJD4Q9H9V9 463 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 DISC1Q9NRI5 854 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 PRKAG2Q9UGJ0 569 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 CTNNA3Q9UI47 895 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 CYP8B1Q9UNU6 501 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 HIF3AQ9Y2N7 669 aa6.87□□□□□ -1.31
CDHR3-213ENST00000488386 RBM8AQ9Y5S9 174 aaKnown RBP6.87□□□□□ -1.31
CDHR3-213ENST00000488386 UMODL1Q5DID0 1318 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 DCDC2CA8MYV0 355 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 IFIT3O14879 490 aaKnown RBP6.86□□□□□ -1.31
CDHR3-213ENST00000488386 ARIH2O95376 493 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 RXRAP19793 462 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 ASPAP45381 313 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 CHMP4BP1P59074 171 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 RPS26P62854 115 aaKnown RBP6.86□□□□□ -1.31
CDHR3-213ENST00000488386 INPP5AQ14642 412 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 LRRC14Q15048 493 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 TSNAXIP1Q2TAA8 658 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 PRSS36Q5K4E3 855 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 BEND4Q6ZU67 534 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 ERMP1Q7Z2K6 904 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 MB21D2Q8IYB1 491 aaPredicted RBP6.86□□□□□ -1.31
CDHR3-213ENST00000488386 NUP133Q8WUM0 1156 aa6.86□□□□□ -1.31
CDHR3-213ENST00000488386 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms