RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 HCSTQ9UBK5 93 aa26.25■■□□□ 1.79
RHBDD3-205ENST00000488106 A0A0U1RQF3 1178 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 EYA4O95677 639 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 ATF7P17544 494 aaPredicted RBP26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 GRIN1Q05586 938 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 MBTD1Q05BQ5 628 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 LONRF3Q496Y0 759 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 SPOUT1Q5T280 376 aaKnown RBP26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 FOXD4L5Q5VV16 416 aaPredicted RBP26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 CABP7Q86V35 215 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 ABI1Q8IZP0 508 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 FOXD4L4Q8WXT5 416 aaPredicted RBP26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 BSNDQ8WZ55 320 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 PNMA5Q96PV4 448 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 RNF19AQ9NV58 838 aa26.24■■□□□ 1.79
RHBDD3-205ENST00000488106 H3BNC9 293 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 HOXA2O43364 376 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 TSPAN1O60635 241 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 POU3F3P20264 500 aaPredicted RBP26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 BMPR1AP36894 532 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 ZNF598Q86UK7 904 aaKnown RBP26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 IFNLR1Q8IU57 520 aaPredicted RBP26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 SLC17A8Q8NDX2 589 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 LPPQ93052 612 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 AK8Q96MA6 479 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 FAM105AQ9NUU6 356 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 XIRP2A4UGR9 3374 aa26.23■■□□□ 1.79
RHBDD3-205ENST00000488106 MARCKSP29966 332 aaPredicted RBP26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 POU5F1BQ06416 359 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 PTPAQ15257 358 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 CLLU1OSQ5K130 101 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 HYIQ5T013 277 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 HELQQ8TDG4 1101 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 CPB2Q96IY4 423 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 C11orf84Q9BUA3 381 aaPredicted RBP26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 RUSC1Q9BVN2 902 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 TMEM117Q9H0C3 514 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 NT5C3AQ9H0P0 336 aa26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 ZSCAN16Q9H4T2 348 aaPredicted RBP26.22■■□□□ 1.79
RHBDD3-205ENST00000488106 CITO14578 2027 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 C5orf67F2Z3F1 127 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 CSPG5O95196 566 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 EOMESO95936 686 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 SSBP05455 408 aaKnown RBP eCLIP26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 HOXA11P31270 313 aaPredicted RBP26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 RAB27AP51159 221 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 RASSF8Q8NHQ8 419 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 CASD1Q96PB1 797 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 NFKBIZQ9BYH8 718 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 PRDM6Q9NQX0 595 aa26.21■■□□□ 1.79
RHBDD3-205ENST00000488106 TCF20Q9UGU0 1960 aaKnown RBP26.2■■□□□ 1.79
RHBDD3-205ENST00000488106 B4GALT5O43286 388 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 LONP1P36776 959 aaKnown RBP26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 UBA7P41226 1012 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 SKIV2LQ15477 1246 aaKnown RBP26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 TMEM119Q4V9L6 283 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 ZBTB8OSQ8IWT0 167 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 LRRC43Q8N309 656 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 KIFAP3Q92845 792 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 CALML4Q96GE6 196 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 USP28Q96RU2 1077 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 TRAIPQ9BWF2 469 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 TYW1Q9NV66 732 aaKnown RBP26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 PCDHB2Q9Y5E7 798 aa26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 SPTBN5Q9NRC6 3674 aaKnown RBP26.2■■□□□ 1.78
RHBDD3-205ENST00000488106 RB1P06400 928 aa26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 SKIP12755 728 aa26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 LIG1P18858 919 aa26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 PCBP1Q15365 356 aaKnown RBP eCLIP26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 AMHR2Q16671 573 aa26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 CDCA2Q69YH5 1023 aaPredicted RBP26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 DEPTORQ8TB45 409 aa26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 IFT74Q96LB3 600 aa26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 KIFC3Q9BVG8 833 aa26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 LMCD1Q9NZU5 365 aa26.19■■□□□ 1.78
RHBDD3-205ENST00000488106 MEIS3P2A8K0S8 358 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 GRM6O15303 877 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 HIP1RO75146 1068 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 VCANP13611 3396 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 ARF4P18085 180 aaPredicted RBP26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 AXLP30530 894 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 NAMPTP43490 491 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 NCBP1Q09161 790 aaKnown RBP26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 KARSQ15046 597 aaKnown RBP26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 PPP2R5AQ15172 486 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 PTPROQ16827 1216 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 SPECC1Q5M775 1068 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 UBXN11Q5T124 520 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 RINT1Q6NUQ1 792 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 NOTUMQ6P988 496 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 MRPL38Q96DV4 380 aaKnown RBP26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 PLVAPQ9BX97 442 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 CSRNP2Q9H175 543 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 C2orf40Q9H1Z8 148 aa26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 ALG13Q9NP73 1137 aaKnown RBP26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 FBXO2Q9UK22 296 aaPredicted RBP26.18■■□□□ 1.78
RHBDD3-205ENST00000488106 RAD51AP2Q09MP3 1159 aa26.17■■□□□ 1.78
RHBDD3-205ENST00000488106 LRRC55Q6ZSA7 311 aa26.17■■□□□ 1.78
RHBDD3-205ENST00000488106 CDR2LQ86X02 465 aaPredicted RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms