RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 PHKA2P46019 1235 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 KCNJ6P48051 423 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 SV2BQ7L1I2 683 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 SRGAP1Q7Z6B7 1085 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 HERC6Q8IVU3 1022 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 USP38Q8NB14 1042 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 APBB2Q92870 758 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 HPS3Q969F9 1004 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 FGFBP2Q9BYJ0 223 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 PBX4Q9BYU1 374 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 TSPYL2Q9H2G4 693 aaPredicted RBP18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 IKZF4Q9H2S9 585 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 FAM13BQ9NYF5 915 aa18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 PIN4Q9Y237 131 aaKnown RBP18.96■□□□□ 0.63
SHROOM1-205ENST00000488072 MEIS3P2A8K0S8 358 aa18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 ACTN4O43707 911 aaKnown RBP18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 KRT18P05783 430 aaKnown RBP18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 TFDP1Q14186 410 aa18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 UBXN11Q5T124 520 aa18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 CDCA2Q69YH5 1023 aaPredicted RBP18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 DDX12PQ92771 950 aa18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 KIFAP3Q92845 792 aa18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 CCDC113Q9H0I3 377 aa18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 TBC1D7Q9P0N9 293 aa18.95■□□□□ 0.62
SHROOM1-205ENST00000488072 DENND3A2RUS2 1198 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 PRR29P0C7W0 189 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 PLS3P13797 630 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 NMT1P30419 496 aaKnown RBP18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 NAMPTP43490 491 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 LRIT3Q3SXY7 679 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 NT5DC1Q5TFE4 455 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 EEF1DP3Q658K8 133 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 IFNLR1Q8IU57 520 aaPredicted RBP18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 DEPTORQ8TB45 409 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 LPPQ93052 612 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 FIZ1Q96SL8 496 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 EIF2AQ9BY44 585 aaKnown RBP18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 NKX2-4Q9H2Z4 354 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 RGS18Q9NS28 235 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 RNF19AQ9NV58 838 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 HCSTQ9UBK5 93 aa18.94■□□□□ 0.62
SHROOM1-205ENST00000488072 LAMA3Q16787 3333 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 FAM237AA0A1B0GTK4 181 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 A0A1W2PPC1 479 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 A0A1W2PQ27 194 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 A0A1W2PQ64 194 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 A0A1W2PQD8 194 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 C9IYK1 514 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 FAM13AO94988 1023 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 AMHP03971 560 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 FGFR1P11362 822 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 ATF7P17544 494 aaPredicted RBP18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 ARF4P18085 180 aaPredicted RBP18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 SFPQP23246 707 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 CDC42EP1Q00587 391 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 CUL4BQ13620 913 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 SFR1Q86XK3 245 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 CRIPAKQ8N1N5 446 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 KCTD17Q8N5Z5 321 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 MYCT1Q8N699 235 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 GLIS3Q8NEA6 775 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 TOP1MTQ969P6 601 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 IFT74Q96LB3 600 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 DRC1Q96MC2 740 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 FZD8Q9H461 694 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 KMT5AQ9NQR1 393 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 AGPAT5Q9NUQ2 364 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 KBTBD4Q9NVX7 518 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 MICAL3Q7RTP6 2002 aa18.93■□□□□ 0.62
SHROOM1-205ENST00000488072 PRKCBP05771 671 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 IDEP14735 1019 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 FXR1P51114 621 aaKnown RBP eCLIP18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 ZNF131P52739 623 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 POU5F1BQ06416 359 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 ZC2HC1CQ53FD0 456 aaPredicted RBP18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 ODR4Q5SWX8 454 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 Q7L0L9 218 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 IQUBQ8NA54 791 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 RNF169Q8NCN4 708 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 MRPS27Q92552 414 aaKnown RBP18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 PAGE5Q96GU1 130 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 SLC9A7Q96T83 725 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 MTIF3Q9H2K0 278 aaKnown RBP18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 HES2Q9Y543 173 aa18.92■□□□□ 0.62
SHROOM1-205ENST00000488072 GJB5O95377 273 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 SYKP43405 635 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 SARSP49591 514 aaKnown RBP18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 FAM189BP81408 668 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 DMP1Q13316 513 aaPredicted RBP18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 PAN2Q504Q3 1202 aaKnown RBP18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 TWF2Q6IBS0 349 aaKnown RBP18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 ZBTB8OSQ8IWT0 167 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 TMEM161BQ8NDZ6 487 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 ZBTB45Q96K62 511 aaPredicted RBP18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 FTHL17Q9BXU8 183 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 NFKBIZQ9BYH8 718 aa18.91■□□□□ 0.62
SHROOM1-205ENST00000488072 TRIM9Q9C026 710 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms