RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 KBTBD13C9JR72 458 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 CNGA1P29973 690 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 PLCD1P51178 756 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 DYNLL1P63167 89 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 RACK1P63244 317 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 ATP8B2P98198 1209 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 MAP3K12Q12852 859 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 RAB3GAP1Q15042 981 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 LRRC41Q15345 812 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 ZNF124Q15973 351 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 TRIM60Q495X7 471 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 ARSHQ5FYA8 562 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 GJC2Q5T442 439 aaPredicted RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 LCE4AQ5TA78 99 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 GK5Q6ZS86 529 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 DPP9Q86TI2 863 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 SIAH1Q8IUQ4 282 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 KSR1Q8IVT5 923 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 REXO1Q8N1G1 1221 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 MSL3Q8N5Y2 521 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 DTWD2Q8NBA8 298 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 BADQ92934 168 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 NKD1Q969G9 470 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 TRIM43Q96BQ3 446 aaPredicted RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 EAF2Q96CJ1 260 aaPredicted RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 VWCEQ96DN2 955 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 MAML3Q96JK9 1138 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 DUSP15Q9H1R2 295 aaPredicted RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 CARS2Q9HA77 564 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 CWC22Q9HCG8 908 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 CABP5Q9NP86 173 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 LMCD1Q9NZU5 365 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 GMIPQ9P107 970 aa6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 SAP30BPQ9UHR5 308 aaKnown RBP6.15□□□□□ -1.42
R3HDM1-218ENST00000487294 CHD9Q3L8U1 2897 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 PARP14Q460N5 1801 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 RGS13O14921 159 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 IDH1O75874 414 aaKnown RBP6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 SLC25A27O95847 323 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 SRFP11831 508 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 ITGB8P26012 769 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 MCM4P33991 863 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 ADCYAP1R1P41586 468 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 TLE2Q04725 743 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 SEPT2Q15019 361 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 TMEM179Q6ZVK1 233 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 MAGEB6Q8N7X4 407 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 BHLHE22Q8NFJ8 381 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 RNF141Q8WVD5 230 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 KREMEN1Q96MU8 473 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 SLC38A3Q99624 504 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 KIAA1522Q9P206 1035 aaPredicted RBP6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 SWAP70Q9UH65 585 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 ATP11BQ9Y2G3 1177 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 TMX2Q9Y320 296 aa6.14□□□□□ -1.43
R3HDM1-218ENST00000487294 SMCHD1A6NHR9 2005 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 SCAMP3O14828 347 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 WDR46O15213 610 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 SURF6O75683 361 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 UBOX5O94941 541 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 ESR1P03372 595 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 CLTBP09497 229 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 RARBP10826 455 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 FCER1AP12319 257 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 FOSL2P15408 326 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 GBP1P32455 592 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 COPB2P35606 906 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 ZNF165P49910 485 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 EPHB4P54760 987 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 NKX3-2P78367 333 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 TTF1Q15361 905 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 ZYXQ15942 572 aaKnown RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 FAM47AQ5JRC9 791 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 KIAA1755Q5JYT7 1200 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 AKNAD1Q5T1N1 836 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 WDR78Q5VTH9 848 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 CDCP2Q5VXM1 449 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 OVOS1Q6IE37 1185 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 CCSAPQ6IQ19 270 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 MAMDC4Q6UXC1 1216 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 RNF180Q86T96 592 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 RIOX2Q8IUF8 465 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 MIGA1Q8NAN2 632 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 KLHDC9Q8NEP7 349 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 MYLIPQ8WY64 445 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 ATG4CQ96DT6 458 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 CCDC17Q96LX7 622 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 TINF2Q9BSI4 451 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 GPR62Q9BZJ7 368 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 ANTXR1Q9H6X2 564 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 SH2D4AQ9H788 454 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 VCPKMTQ9H867 229 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 CNNM2Q9H8M5 875 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 DCP1AQ9NPI6 582 aaPredicted RBP6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 XPNPEP3Q9NQH7 507 aa6.13□□□□□ -1.43
R3HDM1-218ENST00000487294 DDX41Q9UJV9 622 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms