RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 E9PMD0 336 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 ARHGEF15O94989 841 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 CHRM1P11229 460 aaPredicted RBP11.33□□□□□ -0.6
NEK4-204ENST00000487068 LIG1P18858 919 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 MARCKSP29966 332 aaPredicted RBP11.33□□□□□ -0.6
NEK4-204ENST00000487068 CTNNB1P35222 781 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 TXLNAP40222 546 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 UBA7P41226 1012 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 CAPSQ13938 189 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 STK38Q15208 465 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 IL17AQ16552 155 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 ECM1Q16610 540 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 SLC24A5Q71RS6 500 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 CABP7Q86V35 215 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 ZBTB8OSQ8IWT0 167 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 GDPD5Q8WTR4 605 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 NT5C3AQ9H0P0 336 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 GPRC5CQ9NQ84 441 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 RGS18Q9NS28 235 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 CLIC4Q9Y696 253 aa11.33□□□□□ -0.6
NEK4-204ENST00000487068 TCF20Q9UGU0 1960 aaKnown RBP11.33□□□□□ -0.6
NEK4-204ENST00000487068 PRRC2BQ5JSZ5 2229 aaKnown RBP11.33□□□□□ -0.6
NEK4-204ENST00000487068 PDCD11Q14690 1871 aaKnown RBP11.32□□□□□ -0.6
NEK4-204ENST00000487068 CSPG5O95196 566 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 EYA4O95677 639 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 PRR29P0C7W0 189 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 LONP1P36776 959 aaKnown RBP11.32□□□□□ -0.6
NEK4-204ENST00000487068 HTRA4P83105 476 aaPredicted RBP11.32□□□□□ -0.6
NEK4-204ENST00000487068 NCBP1Q09161 790 aaKnown RBP11.32□□□□□ -0.6
NEK4-204ENST00000487068 SPRED2Q7Z698 418 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 SRGAP1Q7Z6B7 1085 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 RTN4RL1Q86UN2 441 aaPredicted RBP11.32□□□□□ -0.6
NEK4-204ENST00000487068 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 DEPTORQ8TB45 409 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 IFT74Q96LB3 600 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 AK8Q96MA6 479 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 ZNF396Q96N95 335 aaPredicted RBP11.32□□□□□ -0.6
NEK4-204ENST00000487068 C17orf80Q9BSJ5 609 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 C1QTNF1Q9BXJ1 281 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 IFT122Q9HBG6 1241 aa11.32□□□□□ -0.6
NEK4-204ENST00000487068 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
NEK4-204ENST00000487068 TBKBP1A7MCY6 615 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 C9IYK1 514 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 RFXAPO00287 272 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 DGKIO75912 1065 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 F13A1P00488 732 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 ZSCAN22P10073 491 aaPredicted RBP11.31□□□□□ -0.6
NEK4-204ENST00000487068 FGFR1P11362 822 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 PDIA4P13667 645 aaKnown RBP11.31□□□□□ -0.6
NEK4-204ENST00000487068 GLRA2P23416 452 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 GATMP50440 423 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 RAD51AP2Q09MP3 1159 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 DHX8Q14562 1220 aaKnown RBP11.31□□□□□ -0.6
NEK4-204ENST00000487068 PPP2R5AQ15172 486 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 AAK1Q2M2I8 961 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 LONRF3Q496Y0 759 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 SP7Q8TDD2 431 aaPredicted RBP11.31□□□□□ -0.6
NEK4-204ENST00000487068 USP28Q96RU2 1077 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 MMTAG2Q9BU76 263 aaKnown RBP11.31□□□□□ -0.6
NEK4-204ENST00000487068 TRIM6Q9C030 488 aaPredicted RBP11.31□□□□□ -0.6
NEK4-204ENST00000487068 AGPAT5Q9NUQ2 364 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 TMEM161AQ9NX61 479 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 RWDD3Q9Y3V2 267 aa11.31□□□□□ -0.6
NEK4-204ENST00000487068 HOXA2O43364 376 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
NEK4-204ENST00000487068 SKIP12755 728 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 CYP11B2P19099 503 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 NCLP19338 710 aaKnown RBP11.3□□□□□ -0.6
NEK4-204ENST00000487068 ARL2P36404 184 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 RAB27AP51159 221 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 GRIN1Q05586 938 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 GRB10Q13322 594 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 DSC3Q14574 896 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 KARSQ15046 597 aaKnown RBP11.3□□□□□ -0.6
NEK4-204ENST00000487068 SKIV2LQ15477 1246 aaKnown RBP11.3□□□□□ -0.6
NEK4-204ENST00000487068 SPECC1Q5M775 1068 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 FAM43BQ6ZT52 329 aaPredicted RBP11.3□□□□□ -0.6
NEK4-204ENST00000487068 KCNK18Q7Z418 384 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 ECHDC2Q86YB7 292 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 CMTR2Q8IYT2 770 aaKnown RBP11.3□□□□□ -0.6
NEK4-204ENST00000487068 KIFAP3Q92845 792 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 CPB2Q96IY4 423 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 DRC1Q96MC2 740 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 SAMD11Q96NU1 681 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 NECAB3Q96P71 396 aaPredicted RBP11.3□□□□□ -0.6
NEK4-204ENST00000487068 CSRNP2Q9H175 543 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 C2orf40Q9H1Z8 148 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 MINDY3Q9H8M7 445 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 POLD4Q9HCU8 107 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 CHST12Q9NRB3 414 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 CCDC39Q9UFE4 941 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 CHD7Q9P2D1 2997 aa11.3□□□□□ -0.6
NEK4-204ENST00000487068 EPOPA6NHQ4 379 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 CCDC169A6NNP5 214 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 HIP1RO75146 1068 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 PLA2G4BP0C869 781 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 BMP1P13497 986 aa11.29□□□□□ -0.6
NEK4-204ENST00000487068 PLCG1P19174 1290 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms