RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 TFIP11Q9UBB9 837 aaKnown RBP14.59□□□□□ -0.07
SF1-216ENST00000486867 STK17AQ9UEE5 414 aa14.59□□□□□ -0.07
SF1-216ENST00000486867 DAXXQ9UER7 740 aaPredicted RBP14.59□□□□□ -0.07
SF1-216ENST00000486867 RCOR1Q9UKL0 485 aa14.59□□□□□ -0.07
SF1-216ENST00000486867 PRRC2BQ5JSZ5 2229 aaKnown RBP14.59□□□□□ -0.07
SF1-216ENST00000486867 PDCD11Q14690 1871 aaKnown RBP14.59□□□□□ -0.07
SF1-216ENST00000486867 DENND3A2RUS2 1198 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 LINC01553A4QN01 128 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 PLA2G4BP0C869 781 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 STAG3L1P0CL83 205 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 ATF7P17544 494 aaPredicted RBP14.58□□□□□ -0.08
SF1-216ENST00000486867 FGFR4P22455 802 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 ERVK-21P61565 698 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 STK38Q15208 465 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 NAALADL2Q58DX5 795 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 ARSHQ5FYA8 562 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 FAM102BQ5T8I3 360 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 PPP2R2DQ66LE6 453 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 KCNG4Q8TDN1 519 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 CLP1Q92989 425 aaKnown RBP14.58□□□□□ -0.08
SF1-216ENST00000486867 CCDC51Q96ER9 411 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 CDK5RAP3Q96JB5 506 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 NTPCRQ9BSD7 190 aaKnown RBP14.58□□□□□ -0.08
SF1-216ENST00000486867 ZBED2Q9BTP6 218 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 CCDC113Q9H0I3 377 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 FZD8Q9H461 694 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 RNF19AQ9NV58 838 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 CFAP45Q9UL16 551 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 ADGRA3Q8IWK6 1321 aa14.58□□□□□ -0.08
SF1-216ENST00000486867 MYO7AQ13402 2215 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 TSPAN1O60635 241 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 CUTAO60888 179 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 EOMESO95936 686 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 ZSCAN20P17040 1043 aaPredicted RBP14.57□□□□□ -0.08
SF1-216ENST00000486867 DNM1Q05193 864 aaKnown RBP14.57□□□□□ -0.08
SF1-216ENST00000486867 GRIN2CQ14957 1233 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 FOXD4L5Q5VV16 416 aaPredicted RBP14.57□□□□□ -0.08
SF1-216ENST00000486867 CATSPER4Q7RTX7 472 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 ECHDC2Q86YB7 292 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 CMTR2Q8IYT2 770 aaKnown RBP14.57□□□□□ -0.08
SF1-216ENST00000486867 FOXD4L4Q8WXT5 416 aaPredicted RBP14.57□□□□□ -0.08
SF1-216ENST00000486867 RSPH1Q8WYR4 309 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 RAD54LQ92698 747 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 PRIMPOLQ96LW4 560 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 DRC1Q96MC2 740 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 C2orf40Q9H1Z8 148 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 REV3LO60673 3130 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 COL6A3P12111 3177 aa14.57□□□□□ -0.08
SF1-216ENST00000486867 A0A087X0B3 334 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 HIP1RO75146 1068 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 UPP2O95045 317 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 SKIP12755 728 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 POU3F3P20264 500 aaPredicted RBP14.56□□□□□ -0.08
SF1-216ENST00000486867 RAB27AP51159 221 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 ZNF131P52739 623 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 SPECC1Q5M775 1068 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 UBXN11Q5T124 520 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 FAM117BQ6P1L5 589 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 MAEAQ7L5Y9 396 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 MRPL10Q7Z7H8 261 aaKnown RBP14.56□□□□□ -0.08
SF1-216ENST00000486867 SPIRE2Q8WWL2 714 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 LARP4BQ92615 738 aaKnown RBP14.56□□□□□ -0.08
SF1-216ENST00000486867 SAMD11Q96NU1 681 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 YME1L1Q96TA2 773 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 CDX2Q99626 313 aaPredicted RBP14.56□□□□□ -0.08
SF1-216ENST00000486867 ARHGAP28Q9P2N2 729 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 CCDC39Q9UFE4 941 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 ODF2LQ9ULJ1 636 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 PIN4Q9Y237 131 aaKnown RBP14.56□□□□□ -0.08
SF1-216ENST00000486867 PCDHB7Q9Y5E2 793 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 CNTNAP2Q9UHC6 1331 aa14.56□□□□□ -0.08
SF1-216ENST00000486867 BRWD1Q9NSI6 2320 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 LRRIQ4A6NIV6 560 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 C5orf67F2Z3F1 127 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
SF1-216ENST00000486867 TXLNAP40222 546 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 NPTX2P47972 431 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 EFNA5P52803 228 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 ZRSR1Q15695 479 aaKnown RBP14.55□□□□□ -0.08
SF1-216ENST00000486867 SHC4Q6S5L8 630 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 CCDC73Q6ZRK6 1079 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 ZBTB8OSQ8IWT0 167 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 IFT74Q96LB3 600 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 TGS1Q96RS0 853 aaKnown RBP14.55□□□□□ -0.08
SF1-216ENST00000486867 PLIN2Q99541 437 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 FAM105AQ9NUU6 356 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 PRMT7Q9NVM4 692 aaPredicted RBP14.55□□□□□ -0.08
SF1-216ENST00000486867 KCNG1Q9UIX4 513 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 PCDHA7Q9UN72 937 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 STXBP5LQ9Y2K9 1186 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 ATP6V1DQ9Y5K8 247 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 ZMYM2Q9UBW7 1377 aa14.55□□□□□ -0.08
SF1-216ENST00000486867 A0A1B0GUA9 196 aa14.54□□□□□ -0.08
SF1-216ENST00000486867 INO80B-WBP1J3KQ70 363 aa14.54□□□□□ -0.08
SF1-216ENST00000486867 INPPL1O15357 1258 aa14.54□□□□□ -0.08
SF1-216ENST00000486867 HOXA2O43364 376 aa14.54□□□□□ -0.08
SF1-216ENST00000486867 ERLIN2O94905 339 aa14.54□□□□□ -0.08
SF1-216ENST00000486867 SCP2P22307 547 aa14.54□□□□□ -0.08
SF1-216ENST00000486867 KRT85P78386 507 aa14.54□□□□□ -0.08
SF1-216ENST00000486867 NUCB2P80303 420 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms