RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 PPP2R5AQ15172 486 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 PAN2Q504Q3 1202 aaKnown RBP20.15■□□□□ 0.82
COL1A1-207ENST00000486572 CDCA2Q69YH5 1023 aaPredicted RBP20.15■□□□□ 0.82
COL1A1-207ENST00000486572 RINT1Q6NUQ1 792 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 FBXO22Q8NEZ5 403 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 BSNDQ8WZ55 320 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 RUSC1Q9BVN2 902 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 RWDD3Q9Y3V2 267 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 RALGAPA2Q2PPJ7 1873 aa20.15■□□□□ 0.82
COL1A1-207ENST00000486572 NLRC5Q86WI3 1866 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 TSPAN1O60635 241 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 EOMESO95936 686 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 SSBP05455 408 aaKnown RBP eCLIP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 LINC00271P0C7V0 271 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 SKIP12755 728 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 IGFBP4P22692 258 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 AXLP30530 894 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 HOXA11P31270 313 aaPredicted RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 NCBP1Q09161 790 aaKnown RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 KARSQ15046 597 aaKnown RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 STK38Q15208 465 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 EPC2Q52LR7 807 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 C1orf186Q6ZWK4 172 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 ZNF598Q86UK7 904 aaKnown RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 ZBTB8OSQ8IWT0 167 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 TMEM192Q8IY95 271 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 SYT2Q8N9I0 419 aaPredicted RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 KRI1Q8N9T8 703 aaKnown RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 RNF169Q8NCN4 708 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 MAFAQ8NHW3 353 aaPredicted RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 GDPD5Q8WTR4 605 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 CLP1Q92989 425 aaKnown RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 IFT74Q96LB3 600 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 TIPINQ9BVW5 301 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 CCSER1Q9C0I3 900 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 C2orf40Q9H1Z8 148 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 FAM105AQ9NUU6 356 aa20.14■□□□□ 0.81
COL1A1-207ENST00000486572 MRPL42Q9Y6G3 142 aaKnown RBP20.14■□□□□ 0.81
COL1A1-207ENST00000486572 TBKBP1A7MCY6 615 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 HIP1RO75146 1068 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 PLA2G4BP0C869 781 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 ATF7P17544 494 aaPredicted RBP20.13■□□□□ 0.81
COL1A1-207ENST00000486572 PLCG1P19174 1290 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 GUCY2CP25092 1073 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 CTNNB1P35222 781 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 SLC12A3P55017 1021 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 AMHR2Q16671 573 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 SPECC1Q5M775 1068 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 NOTUMQ6P988 496 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 LINC00301Q8NCQ3 95 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 DEPTORQ8TB45 409 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 DRC1Q96MC2 740 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 CLIC6Q96NY7 704 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 TMEM117Q9H0C3 514 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 KCND2Q9NZV8 630 aa20.13■□□□□ 0.81
COL1A1-207ENST00000486572 FNDC1Q4ZHG4 1894 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-207ENST00000486572 GTPBP6O43824 516 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-207ENST00000486572 LPXNO60711 386 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 YEATS4O95619 227 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 POU3F3P20264 500 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-207ENST00000486572 TXLNAP40222 546 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 ABI1Q8IZP0 508 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 DAW1Q8N136 415 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 SYMPKQ92797 1274 aaKnown RBP20.12■□□□□ 0.81
COL1A1-207ENST00000486572 CCDC51Q96ER9 411 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 EPSTI1Q96J88 318 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 PRIMPOLQ96LW4 560 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 POLD4Q9HCU8 107 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 RNF19AQ9NV58 838 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 PRMT7Q9NVM4 692 aaPredicted RBP20.12■□□□□ 0.81
COL1A1-207ENST00000486572 TFIP11Q9UBB9 837 aaKnown RBP20.12■□□□□ 0.81
COL1A1-207ENST00000486572 TRANK1O15050 2925 aa20.12■□□□□ 0.81
COL1A1-207ENST00000486572 MYO9BQ13459 2157 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 C5orf67F2Z3F1 127 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 SPTLC2O15270 562 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 B4GALT5O43286 388 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 ZNF623O75123 536 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 BMPR1AP36894 532 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 MAPK7Q13164 816 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 FOXD4L6Q3SYB3 417 aaPredicted RBP20.11■□□□□ 0.81
COL1A1-207ENST00000486572 CLLU1OSQ5K130 101 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 UBXN11Q5T124 520 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 FOXD4L3Q6VB84 417 aaPredicted RBP20.11■□□□□ 0.81
COL1A1-207ENST00000486572 USP49Q70CQ1 688 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 LRRC15Q8TF66 581 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 CPB2Q96IY4 423 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 BLOC1S4Q9NUP1 217 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 CCDC39Q9UFE4 941 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 PCDHB2Q9Y5E7 798 aa20.11■□□□□ 0.81
COL1A1-207ENST00000486572 CNTNAP2Q9UHC6 1331 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 H3BNC9 293 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 PPP6R2O75170 966 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 BRD1O95696 1058 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 RB1P06400 928 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 ARF4P18085 180 aaPredicted RBP20.1■□□□□ 0.81
COL1A1-207ENST00000486572 EFNA5P52803 228 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 DMP1Q13316 513 aaPredicted RBP20.1■□□□□ 0.81
COL1A1-207ENST00000486572 MAPK6Q16659 721 aa20.1■□□□□ 0.81
COL1A1-207ENST00000486572 FAM187BQ17R55 369 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms