RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 ZNF623O75123 536 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 ATF7P17544 494 aaPredicted RBP24.47■■□□□ 1.51
HLA-F-228ENST00000486194 RARRES1P49788 294 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 KRT17Q04695 432 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 POU5F1BQ06416 359 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 ZNF174Q15697 407 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 GLB1LQ6UWU2 654 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 LRRC55Q6ZSA7 311 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 HELQQ8TDG4 1101 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 HCSTQ9UBK5 93 aa24.47■■□□□ 1.51
HLA-F-228ENST00000486194 ERLIN2O94905 339 aa24.46■■□□□ 1.51
HLA-F-228ENST00000486194 IRS1P35568 1242 aa24.46■■□□□ 1.51
HLA-F-228ENST00000486194 TECP42680 631 aa24.46■■□□□ 1.51
HLA-F-228ENST00000486194 NCBP1Q09161 790 aaKnown RBP24.46■■□□□ 1.51
HLA-F-228ENST00000486194 ADAM15Q13444 863 aa24.46■■□□□ 1.51
HLA-F-228ENST00000486194 EFHBQ8N7U6 833 aa24.46■■□□□ 1.51
HLA-F-228ENST00000486194 MRPS27Q92552 414 aaKnown RBP24.46■■□□□ 1.51
HLA-F-228ENST00000486194 POLR3CQ9BUI4 534 aaPredicted RBP24.46■■□□□ 1.51
HLA-F-228ENST00000486194 XPNPEP1Q9NQW7 623 aa24.46■■□□□ 1.51
HLA-F-228ENST00000486194 SPG21Q9NZD8 308 aa24.46■■□□□ 1.51
HLA-F-228ENST00000486194 U2AF2P26368 475 aaKnown RBP eCLIP24.45■■□□□ 1.5
HLA-F-228ENST00000486194 LTBRP36941 435 aa24.45■■□□□ 1.5
HLA-F-228ENST00000486194 ALDH7A1P49419 539 aaKnown RBP24.45■■□□□ 1.5
HLA-F-228ENST00000486194 NDUFV1P49821 464 aa24.45■■□□□ 1.5
HLA-F-228ENST00000486194 FAM178BQ8IXR5 827 aa24.45■■□□□ 1.5
HLA-F-228ENST00000486194 PIGOQ8TEQ8 1089 aa24.45■■□□□ 1.5
HLA-F-228ENST00000486194 NACC1Q96RE7 527 aa24.45■■□□□ 1.5
HLA-F-228ENST00000486194 CDCA3Q99618 268 aaPredicted RBP24.45■■□□□ 1.5
HLA-F-228ENST00000486194 BRWD1Q9NSI6 2320 aa24.45■■□□□ 1.5
HLA-F-228ENST00000486194 SPATA31C1P0DKV0 1188 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 IL9P15248 144 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 AXLP30530 894 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 NRIP1P48552 1158 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 MCM2P49736 904 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 PTENP60484 403 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 HAUS3Q68CZ6 603 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 CATSPER3Q86XQ3 398 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 TLE6Q9H808 572 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 MINDY3Q9H8M7 445 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 NGRNQ9NPE2 291 aaKnown RBP24.44■■□□□ 1.5
HLA-F-228ENST00000486194 PRKAG3Q9UGI9 489 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 DBR1Q9UK59 544 aaKnown RBP24.44■■□□□ 1.5
HLA-F-228ENST00000486194 PCDHB2Q9Y5E7 798 aa24.44■■□□□ 1.5
HLA-F-228ENST00000486194 MUTP22033 750 aa24.43■■□□□ 1.5
HLA-F-228ENST00000486194 RPA1P27694 616 aa24.43■■□□□ 1.5
HLA-F-228ENST00000486194 GTF2F1P35269 517 aaKnown RBP eCLIP24.43■■□□□ 1.5
HLA-F-228ENST00000486194 BMS1Q14692 1282 aaKnown RBP24.43■■□□□ 1.5
HLA-F-228ENST00000486194 ADGRD2Q7Z7M1 963 aa24.43■■□□□ 1.5
HLA-F-228ENST00000486194 IFNLR1Q8IU57 520 aaPredicted RBP24.43■■□□□ 1.5
HLA-F-228ENST00000486194 CNNM3Q8NE01 707 aa24.43■■□□□ 1.5
HLA-F-228ENST00000486194 MCPH1Q8NEM0 835 aa24.43■■□□□ 1.5
HLA-F-228ENST00000486194 NFKBIZQ9BYH8 718 aa24.43■■□□□ 1.5
HLA-F-228ENST00000486194 STK24Q9Y6E0 443 aa24.43■■□□□ 1.5
HLA-F-228ENST00000486194 ARID2Q68CP9 1835 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 CNTNAP2Q9UHC6 1331 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 FSCN2O14926 492 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 ARL2P36404 184 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 NOMO2Q5JPE7 1267 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 RBM23Q86U06 439 aaKnown RBP24.42■■□□□ 1.5
HLA-F-228ENST00000486194 URGCPQ8TCY9 931 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 LPPQ93052 612 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 CCDC51Q96ER9 411 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 C1QTNF1Q9BXJ1 281 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 RAB34Q9BZG1 259 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 ENTPD7Q9NQZ7 604 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 CD207Q9UJ71 328 aa24.42■■□□□ 1.5
HLA-F-228ENST00000486194 ATG2AQ2TAZ0 1938 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 INO80B-WBP1J3KQ70 363 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 LINC01565O15544 149 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 USO1O60763 962 aaKnown RBP24.41■■□□□ 1.5
HLA-F-228ENST00000486194 TBX10O75333 385 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 MED24O75448 989 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 HOXA11P31270 313 aaPredicted RBP24.41■■□□□ 1.5
HLA-F-228ENST00000486194 FXR2P51116 673 aaKnown RBP eCLIP24.41■■□□□ 1.5
HLA-F-228ENST00000486194 BCAR1P56945 870 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 ERVFC1P60507 584 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 RNASELQ05823 741 aaKnown RBP24.41■■□□□ 1.5
HLA-F-228ENST00000486194 DLX2Q07687 328 aaPredicted RBP24.41■■□□□ 1.5
HLA-F-228ENST00000486194 SMAD4Q13485 552 aaKnown RBP24.41■■□□□ 1.5
HLA-F-228ENST00000486194 NOTUMQ6P988 496 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 MRPL10Q7Z7H8 261 aaKnown RBP24.41■■□□□ 1.5
HLA-F-228ENST00000486194 GJD3Q8N144 294 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 SLC39A11Q8N1S5 342 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 TMX3Q96JJ7 454 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 TCF25Q9BQ70 676 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 UBN1Q9NPG3 1134 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 KANSL3Q9P2N6 904 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 PLXNA4Q9HCM2 1894 aa24.41■■□□□ 1.5
HLA-F-228ENST00000486194 LAD1O00515 517 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 OFD1O75665 1012 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 SRGAP2BP0DMP2 458 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 SSTR3P32745 418 aaPredicted RBP24.4■■□□□ 1.5
HLA-F-228ENST00000486194 PBX3P40426 434 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 CAPSQ13938 189 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 LONRF3Q496Y0 759 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 ASAP3Q8TDY4 903 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 TMEM169Q96HH4 297 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 POLR3FQ9H1D9 316 aaPredicted RBP24.4■■□□□ 1.5
HLA-F-228ENST00000486194 RSAD1Q9HA92 442 aa24.4■■□□□ 1.5
HLA-F-228ENST00000486194 TBC1D13Q9NVG8 400 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms