RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TMEM238LA0A1B0GVL6 79 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 PROB1E7EW31 1015 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 ZBED4O75132 1171 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 NDUFB10O96000 172 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 LTBRP36941 435 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 CDK8P49336 464 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 BFSP2Q13515 415 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 PTPROQ16827 1216 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 TCTN1Q2MV58 587 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 LRRFIP1Q32MZ4 808 aaKnown RBP7.87□□□□□ -1.15
SMC4-217ENST00000485867 CNKSR3Q6P9H4 555 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 EP400NLQ6ZTU2 488 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 C16orf86Q6ZW13 317 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 CBLL1Q75N03 491 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 ZNF765Q7L2R6 523 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 ASCL5Q7RTU5 278 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 RPAINQ86UA6 219 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 LCORLQ8N3X6 602 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 GLIS3Q8NEA6 775 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 KRTAP9-9Q9BYP9 154 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 KRTAP9-4Q9BYQ2 154 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 API5Q9BZZ5 524 aaKnown RBP7.87□□□□□ -1.15
SMC4-217ENST00000485867 NIF3L1Q9GZT8 377 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 A1CFQ9NQ94 594 aaKnown RBP7.87□□□□□ -1.15
SMC4-217ENST00000485867 HOMER2Q9NSB8 354 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 CTNNA3Q9UI47 895 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 CTDP1Q9Y5B0 961 aaPredicted RBP7.87□□□□□ -1.15
SMC4-217ENST00000485867 KMT2BQ9UMN6 2715 aaPredicted RBP7.87□□□□□ -1.15
SMC4-217ENST00000485867 ACACBO00763 2458 aa7.87□□□□□ -1.15
SMC4-217ENST00000485867 CEP250Q9BV73 2442 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 CYP2D7A0A087X1C5 515 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 MBTPS2O43462 519 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 CXCL10P02778 98 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 MYL3P08590 195 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 PDE6AP16499 860 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 OAZ1P54368 228 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 VCPP55072 806 aaKnown RBP7.86□□□□□ -1.15
SMC4-217ENST00000485867 CYP27A1Q02318 531 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 DUSP28Q4G0W2 176 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 NFRKBQ6P4R8 1299 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 EEPD1Q7L9B9 569 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 AFAP1L1Q8TED9 768 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 ATOH1Q92858 354 aaPredicted RBP7.86□□□□□ -1.15
SMC4-217ENST00000485867 ALKBH8Q96BT7 664 aaKnown RBP7.86□□□□□ -1.15
SMC4-217ENST00000485867 CTAGE1Q96RT6 745 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 CRBNQ96SW2 442 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 MTG1Q9BT17 334 aaPredicted RBP7.86□□□□□ -1.15
SMC4-217ENST00000485867 IRF2BPLQ9H1B7 796 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
SMC4-217ENST00000485867 ACAD9Q9H845 621 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 VTA1Q9NP79 307 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 CLDND1Q9NY35 253 aa7.86□□□□□ -1.15
SMC4-217ENST00000485867 ZC3H7BQ9UGR2 993 aaKnown RBP7.86□□□□□ -1.15
SMC4-217ENST00000485867 SPTBN2O15020 2390 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 ABHD14A-ACY1A0A1B0GW23 586 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 PRR23AA6NEV1 266 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 F5H6K3 240 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 STXBP3O00186 592 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 NBNO60934 754 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 GNAI2P04899 355 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 ID4P47928 161 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 CPT1AP50416 773 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 ZXDAP98168 799 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 PTPN11Q06124 597 aaPredicted RBP7.85□□□□□ -1.15
SMC4-217ENST00000485867 KLRC3Q07444 240 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 DLX2Q07687 328 aaPredicted RBP7.85□□□□□ -1.15
SMC4-217ENST00000485867 OS9Q13438 667 aaPredicted RBP7.85□□□□□ -1.15
SMC4-217ENST00000485867 SMAD4Q13485 552 aaKnown RBP7.85□□□□□ -1.15
SMC4-217ENST00000485867 GRM2Q14416 872 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 CLUL1Q15846 466 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 EPC2Q52LR7 807 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 C12orf60Q5U649 245 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 LRRC8DQ7L1W4 858 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 CAGE1Q8TC20 777 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 EAF2Q96CJ1 260 aaPredicted RBP7.85□□□□□ -1.15
SMC4-217ENST00000485867 SAMD11Q96NU1 681 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 FSD1Q9BTV5 496 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 RBCK1Q9BYM8 510 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 CCDC8Q9H0W5 538 aaPredicted RBP7.85□□□□□ -1.15
SMC4-217ENST00000485867 CCDC86Q9H6F5 360 aaKnown RBP7.85□□□□□ -1.15
SMC4-217ENST00000485867 RNF146Q9NTX7 359 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 INSL6Q9Y581 213 aa7.85□□□□□ -1.15
SMC4-217ENST00000485867 ZNF532Q9HCE3 1301 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 MYO10Q9HD67 2058 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 TCRBV5S4A2TA0A5A2 114 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 E9PSI1 815 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 H3BNC9 293 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 RBAK-RBAKDNI3L0D1 243 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 TMPRSS2O15393 492 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 PRKAB2O43741 272 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 EFCAB14O75071 495 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 GADD45BO75293 160 aaPredicted RBP7.84□□□□□ -1.15
SMC4-217ENST00000485867 TBX10O75333 385 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 KRT37O76014 449 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 PARNO95453 639 aaKnown RBP7.84□□□□□ -1.15
SMC4-217ENST00000485867 HTRA4P83105 476 aaPredicted RBP7.84□□□□□ -1.15
SMC4-217ENST00000485867 RBL2Q08999 1139 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 GPM6BQ13491 265 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 SLC9C2Q5TAH2 1124 aa7.84□□□□□ -1.15
SMC4-217ENST00000485867 OR6J1Q8NGC5 347 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms