RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 TRIM29Q14134 588 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 CBX2Q14781 532 aaPredicted RBP15.38■□□□□ 0.05
SCAF4-206ENST00000485790 PCBP1Q15365 356 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCAF4-206ENST00000485790 NOMO2Q5JPE7 1267 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 LLGL2Q6P1M3 1020 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 SLC39A11Q8N1S5 342 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 URGCPQ8TCY9 931 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 UBN1Q9NPG3 1134 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 FAM105AQ9NUU6 356 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 PCDHA12Q9UN75 941 aa15.38■□□□□ 0.05
SCAF4-206ENST00000485790 YWHABP31946 246 aaKnown RBP15.37■□□□□ 0.05
SCAF4-206ENST00000485790 PBX3P40426 434 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 NPEPPSP55786 919 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 ITIH3Q06033 890 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 LAMTOR4Q0VGL1 99 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 MXD4Q14582 209 aaPredicted RBP15.37■□□□□ 0.05
SCAF4-206ENST00000485790 XKR9Q5GH70 373 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 PLA2G4FQ68DD2 849 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 NCAPH2Q6IBW4 605 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 TRIM67Q6ZTA4 783 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 KSR1Q8IVT5 923 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 TPH2Q8IWU9 490 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 VPS52Q8N1B4 723 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 CNNM3Q8NE01 707 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 SUSD6Q92537 303 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 PBXIP1Q96AQ6 731 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 NECTIN4Q96NY8 510 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 FAM193BQ96PV7 902 aaPredicted RBP15.37■□□□□ 0.05
SCAF4-206ENST00000485790 S1PR5Q9H228 398 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 PPP4R2Q9NY27 417 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 VAV3Q9UKW4 847 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 NR2E1Q9Y466 385 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 PCDHB2Q9Y5E7 798 aa15.37■□□□□ 0.05
SCAF4-206ENST00000485790 C2orf71A6NGG8 1288 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 NT5C1B-RDH14C9J2C7 533 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 ZC3H11AO75152 810 aaKnown RBP eCLIP15.36■□□□□ 0.05
SCAF4-206ENST00000485790 OFD1O75665 1012 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 ZXDAP98168 799 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 TFDP1Q14186 410 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 LONRF3Q496Y0 759 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 ERICH6BQ5W0A0 696 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 BMP8AQ7Z5Y6 402 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 ZBTB33Q86T24 672 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 DDX53Q86TM3 631 aaKnown RBP15.36■□□□□ 0.05
SCAF4-206ENST00000485790 PPFIBP1Q86W92 1011 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 OXER1Q8TDS5 423 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 HAS1Q92839 578 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 TMEM143Q96AN5 459 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 LXNQ9BS40 222 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 DHX33Q9H6R0 707 aaKnown RBP15.36■□□□□ 0.05
SCAF4-206ENST00000485790 IFT122Q9HBG6 1241 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 INPP5FQ9Y2H2 1132 aa15.36■□□□□ 0.05
SCAF4-206ENST00000485790 CLASP2O75122 1294 aaKnown RBP15.35■□□□□ 0.05
SCAF4-206ENST00000485790 NR1I2O75469 434 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 GALTP07902 379 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
SCAF4-206ENST00000485790 AK2P54819 239 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 RBM10P98175 930 aaKnown RBP15.35■□□□□ 0.05
SCAF4-206ENST00000485790 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
SCAF4-206ENST00000485790 KCNC3Q14003 757 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 ATAT1Q5SQI0 421 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 SYCE2Q6PIF2 218 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 HFE2Q6ZVN8 426 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 MRPL10Q7Z7H8 261 aaKnown RBP15.35■□□□□ 0.05
SCAF4-206ENST00000485790 RNF149Q8NC42 400 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 VN1R2Q8NFZ6 395 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 LPPQ93052 612 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 IGSF21Q96ID5 467 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 DYDC2Q96IM9 177 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 RIPOR3Q96MK2 946 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 CCDC43Q96MW1 224 aaKnown RBP15.35■□□□□ 0.05
SCAF4-206ENST00000485790 PRRX2Q99811 253 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 ADAM7Q9H2U9 754 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 AGPAT5Q9NUQ2 364 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 TBC1D13Q9NVG8 400 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 RGL1Q9NZL6 768 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 RALGAPA2Q2PPJ7 1873 aa15.35■□□□□ 0.05
SCAF4-206ENST00000485790 MYO7AQ13402 2215 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 TMEM221A6NGB7 291 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 M0R296 226 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 ERLIN2O94905 339 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 SLITRK3O94933 977 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 XRCC6P12956 609 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCAF4-206ENST00000485790 AXLP30530 894 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 MTHFRP42898 656 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 CTTNQ14247 550 aaKnown RBP15.34■□□□□ 0.05
SCAF4-206ENST00000485790 SAFBQ15424 915 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCAF4-206ENST00000485790 CALCRLQ16602 461 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 FERMT3Q86UX7 667 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 SUGP1Q8IWZ8 645 aaKnown RBP15.34■□□□□ 0.05
SCAF4-206ENST00000485790 HACE1Q8IYU2 909 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 NECAB1Q8N987 351 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 ZNF579Q8NAF0 562 aaKnown RBP15.34■□□□□ 0.05
SCAF4-206ENST00000485790 MTRQ99707 1265 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 APOL5Q9BWW9 433 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 EMILIN2Q9BXX0 1053 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 GBP3Q9H0R5 595 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 GJB4Q9NTQ9 266 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 ANKEF1Q9NU02 776 aa15.34■□□□□ 0.05
SCAF4-206ENST00000485790 DZANK1Q9NVP4 752 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms