RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 SLC5A5Q92911 643 aa11.91□□□□□ -0.5
HMGN1-215ENST00000485550 FAM167AQ96KS9 214 aa11.91□□□□□ -0.5
HMGN1-215ENST00000485550 MAP7D2Q96T17 732 aa11.91□□□□□ -0.5
HMGN1-215ENST00000485550 RIT2Q99578 217 aa11.91□□□□□ -0.5
HMGN1-215ENST00000485550 TM6SF1Q9BZW5 370 aa11.91□□□□□ -0.5
HMGN1-215ENST00000485550 CWH43Q9H720 699 aa11.91□□□□□ -0.5
HMGN1-215ENST00000485550 ATP6V0A4Q9HBG4 840 aa11.91□□□□□ -0.5
HMGN1-215ENST00000485550 C1orf112Q9NSG2 853 aa11.91□□□□□ -0.5
HMGN1-215ENST00000485550 EPB41L2O43491 1005 aaKnown RBP11.9□□□□□ -0.5
HMGN1-215ENST00000485550 CSDE1O75534 798 aaKnown RBP11.9□□□□□ -0.5
HMGN1-215ENST00000485550 PSMD10O75832 226 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 NEFLP07196 543 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 HOXB8P17481 243 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-215ENST00000485550 TMOD1P28289 359 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 PBX3P40426 434 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 JAK3P52333 1124 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 INF2Q27J81 1249 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 OTOGLQ3ZCN5 2332 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 MTERF2Q49AM1 385 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 Q4G0T1 1027 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 CWF19L1Q69YN2 538 aaKnown RBP11.9□□□□□ -0.5
HMGN1-215ENST00000485550 LINC01465Q8N7H1 131 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 RNF169Q8NCN4 708 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 RMDN1Q96DB5 314 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 SCLT1Q96NL6 688 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 C22orf23Q9BZE7 217 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 ADAMTS10Q9H324 1103 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 GJB4Q9NTQ9 266 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 LIMD1Q9UGP4 676 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 HCFC2Q9Y5Z7 792 aa11.9□□□□□ -0.5
HMGN1-215ENST00000485550 DNAH14Q0VDD8 3507 aa11.9□□□□□ -0.51
HMGN1-215ENST00000485550 M0R2N6 131 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 PI15O43692 258 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 ZSCAN20P17040 1043 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-215ENST00000485550 LAG3P18627 525 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 SFNP31947 248 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 CA8P35219 290 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 GPC3P51654 580 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 CLCN5P51795 746 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 FAM189BP81408 668 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 TBC1D8BQ0IIM8 1120 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 SCRN1Q12765 414 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 DRP2Q13474 957 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 DSC3Q14574 896 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 NONOQ15233 471 aaKnown RBP eCLIP11.89□□□□□ -0.51
HMGN1-215ENST00000485550 NPY5RQ15761 445 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 LETM2Q2VYF4 491 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 TPRNQ4KMQ1 711 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 RARS2Q5T160 578 aaKnown RBP11.89□□□□□ -0.51
HMGN1-215ENST00000485550 CES5AQ6NT32 575 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 KANK3Q6NY19 840 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 TMC7Q7Z402 723 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 NLRP7Q8WX94 980 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 CASP10Q92851 521 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 SLKQ9H2G2 1235 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-215ENST00000485550 TMEM161AQ9NX61 479 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 SEPT9Q9UHD8 586 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-215ENST00000485550 PUF60Q9UHX1 559 aaKnown RBP11.89□□□□□ -0.51
HMGN1-215ENST00000485550 LZTS1Q9Y250 596 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 DOCK8Q8NF50 2099 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 EPG5Q9HCE0 2579 aa11.89□□□□□ -0.51
HMGN1-215ENST00000485550 CYP3A7-CYP3A51PA0A087WV96 503 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 SLC37A4O43826 429 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 KRT37O76014 449 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 EIF4BP23588 611 aaKnown RBP11.88□□□□□ -0.51
HMGN1-215ENST00000485550 CYP3A7P24462 503 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 PLCB3Q01970 1234 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 ITIH3Q06033 890 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 ANGPT1Q15389 498 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 DGLUCYQ7Z3D6 616 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 KIAA2013Q8IYS2 634 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 C12orf76Q8N812 135 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-215ENST00000485550 TDRD5Q8NAT2 981 aaKnown RBP11.88□□□□□ -0.51
HMGN1-215ENST00000485550 DAGLBQ8NCG7 672 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 KCNG4Q8TDN1 519 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 OXER1Q8TDS5 423 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 NECTIN4Q96NY8 510 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 ADAM7Q9H2U9 754 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 NGRNQ9NPE2 291 aaKnown RBP11.88□□□□□ -0.51
HMGN1-215ENST00000485550 DDX25Q9UHL0 483 aaKnown RBP11.88□□□□□ -0.51
HMGN1-215ENST00000485550 DBR1Q9UK59 544 aaKnown RBP11.88□□□□□ -0.51
HMGN1-215ENST00000485550 TPCN1Q9ULQ1 816 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 MIA3Q5JRA6 1907 aa11.88□□□□□ -0.51
HMGN1-215ENST00000485550 CACNA1GO43497 2377 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 CCDC194A0A1B0GVG4 234 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 EML1O00423 815 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 STBD1O95210 358 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 DARSP14868 501 aaKnown RBP11.87□□□□□ -0.51
HMGN1-215ENST00000485550 NPR3P17342 541 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 AOC1P19801 751 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 MTHFRP42898 656 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 TARBP2Q15633 366 aaKnown RBP11.87□□□□□ -0.51
HMGN1-215ENST00000485550 LONRF3Q496Y0 759 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 XKR3Q5GH77 459 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 GALNT17Q6IS24 598 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 KCNT2Q6UVM3 1135 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 B3GNT9Q6UX72 402 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
HMGN1-215ENST00000485550 KRT25Q7Z3Z0 450 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms