RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 RNF169Q8NCN4 708 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 SMRP1Q8NCR6 262 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 PRPF31Q8WWY3 499 aaKnown RBP22.16■■□□□ 1.14
HPS4-213ENST00000483631 KHSRPQ92945 711 aaKnown RBP eCLIP22.16■■□□□ 1.14
HPS4-213ENST00000483631 MTMR9Q96QG7 549 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 EIF2AK1Q9BQI3 630 aaKnown RBP22.16■■□□□ 1.14
HPS4-213ENST00000483631 TTC12Q9H892 705 aaPredicted RBP22.16■■□□□ 1.14
HPS4-213ENST00000483631 ANKEF1Q9NU02 776 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 FAM105AQ9NUU6 356 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 CLEC1BQ9P126 229 aa22.16■■□□□ 1.14
HPS4-213ENST00000483631 GLP2RO95838 553 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 CYP4A11Q02928 519 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 POU5F1BQ06416 359 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 LAMTOR4Q0VGL1 99 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 CTTNQ14247 550 aaKnown RBP22.15■■□□□ 1.14
HPS4-213ENST00000483631 MXD4Q14582 209 aaPredicted RBP22.15■■□□□ 1.14
HPS4-213ENST00000483631 XKR9Q5GH70 373 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 TMEM184AQ6ZMB5 413 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 FERMT3Q86UX7 667 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 SLC39A11Q8N1S5 342 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 HELQQ8TDG4 1101 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 PGBD4Q96DM1 585 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 ZSCAN31Q96LW9 406 aaPredicted RBP22.15■■□□□ 1.14
HPS4-213ENST00000483631 MTRQ99707 1265 aa22.15■■□□□ 1.14
HPS4-213ENST00000483631 DGAT1O75907 488 aa22.14■■□□□ 1.13
HPS4-213ENST00000483631 SRGAP2BP0DMP2 458 aa22.14■■□□□ 1.13
HPS4-213ENST00000483631 XRCC6P12956 609 aaKnown RBP eCLIP22.14■■□□□ 1.13
HPS4-213ENST00000483631 ALDH7A1P49419 539 aaKnown RBP22.14■■□□□ 1.13
HPS4-213ENST00000483631 HMGN5P82970 282 aaKnown RBP22.14■■□□□ 1.13
HPS4-213ENST00000483631 GLB1LQ6UWU2 654 aa22.14■■□□□ 1.13
HPS4-213ENST00000483631 RBM23Q86U06 439 aaKnown RBP22.14■■□□□ 1.13
HPS4-213ENST00000483631 TPH2Q8IWU9 490 aa22.14■■□□□ 1.13
HPS4-213ENST00000483631 TMEM143Q96AN5 459 aa22.14■■□□□ 1.13
HPS4-213ENST00000483631 LRFN3Q9BTN0 628 aa22.14■■□□□ 1.13
HPS4-213ENST00000483631 KCNC3Q14003 757 aa22.13■■□□□ 1.13
HPS4-213ENST00000483631 IFNLR1Q8IU57 520 aaPredicted RBP22.13■■□□□ 1.13
HPS4-213ENST00000483631 TCF25Q9BQ70 676 aa22.13■■□□□ 1.13
HPS4-213ENST00000483631 ENTPD7Q9NQZ7 604 aa22.13■■□□□ 1.13
HPS4-213ENST00000483631 SH2B1Q9NRF2 756 aaPredicted RBP22.13■■□□□ 1.13
HPS4-213ENST00000483631 ARIH1Q9Y4X5 557 aaPredicted RBP22.13■■□□□ 1.13
HPS4-213ENST00000483631 PCDHGC5Q9Y5F6 944 aa22.13■■□□□ 1.13
HPS4-213ENST00000483631 CNTNAP2Q9UHC6 1331 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 SRGAP2CP0DJJ0 459 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 AXLP30530 894 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 TXKP42681 527 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 BMS1Q14692 1282 aaKnown RBP22.12■■□□□ 1.13
HPS4-213ENST00000483631 CLUL1Q15846 466 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 MRPL10Q7Z7H8 261 aaKnown RBP22.12■■□□□ 1.13
HPS4-213ENST00000483631 RNF149Q8NC42 400 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 CNNM3Q8NE01 707 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 C8orf76Q96K31 380 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 FOXP1Q9H334 677 aaPredicted RBP22.12■■□□□ 1.13
HPS4-213ENST00000483631 XPNPEP1Q9NQW7 623 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 STK39Q9UEW8 545 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 PCDHB2Q9Y5E7 798 aa22.12■■□□□ 1.13
HPS4-213ENST00000483631 DCXO43602 365 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 BCAR1P56945 870 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 PTENP60484 403 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 TFDP1Q14186 410 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 NOMO2Q5JPE7 1267 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 CCDC51Q96ER9 411 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 TMEM169Q96HH4 297 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 NFKBIZQ9BYH8 718 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 MINDY3Q9H8M7 445 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 C11orf16Q9NQ32 467 aa22.11■■□□□ 1.13
HPS4-213ENST00000483631 WNT7AO00755 349 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 PER2O15055 1255 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 ZBTB39O15060 712 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 OFD1O75665 1012 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 HOXA11P31270 313 aaPredicted RBP22.1■■□□□ 1.13
HPS4-213ENST00000483631 RARRES1P49788 294 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 SMC1AQ14683 1233 aaKnown RBP22.1■■□□□ 1.13
HPS4-213ENST00000483631 PLPP4Q5VZY2 271 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 TMC7Q7Z402 723 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 CCDC83Q8IWF9 413 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 FBXO18Q8NFZ0 1043 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 CCDC43Q96MW1 224 aaKnown RBP22.1■■□□□ 1.13
HPS4-213ENST00000483631 UBN1Q9NPG3 1134 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 TBC1D13Q9NVG8 400 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 KANSL3Q9P2N6 904 aa22.1■■□□□ 1.13
HPS4-213ENST00000483631 BARX2Q9UMQ3 279 aaPredicted RBP22.1■■□□□ 1.13
HPS4-213ENST00000483631 PRR33A8MZF0 331 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 ERLIN2O94905 339 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 HOXB8P17481 243 aaPredicted RBP22.09■■□□□ 1.13
HPS4-213ENST00000483631 ARL2P36404 184 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 PBX3P40426 434 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 TRAPPC10P48553 1259 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 NCBP1Q09161 790 aaKnown RBP22.09■■□□□ 1.13
HPS4-213ENST00000483631 GIT2Q14161 759 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 MRPL43Q8N983 215 aaKnown RBP22.09■■□□□ 1.13
HPS4-213ENST00000483631 VN1R2Q8NFZ6 395 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 URGCPQ8TCY9 931 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 LPPQ93052 612 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 TUFT1Q9NNX1 390 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 IRAK3Q9Y616 596 aa22.09■■□□□ 1.13
HPS4-213ENST00000483631 ZC3H11AO75152 810 aaKnown RBP eCLIP22.08■■□□□ 1.13
HPS4-213ENST00000483631 NCLP19338 710 aaKnown RBP22.08■■□□□ 1.13
HPS4-213ENST00000483631 MCM7P33993 719 aa22.08■■□□□ 1.13
HPS4-213ENST00000483631 RBM25P49756 843 aaKnown RBP22.08■■□□□ 1.13
HPS4-213ENST00000483631 FOSBP53539 338 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms