RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CYTH1Q15438 398 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 KRT40Q6A162 431 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CCSAPQ6IQ19 270 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 ZNF449Q6P9G9 518 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 IZUMO2Q6UXV1 221 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 RBM44Q6ZP01 1051 aaKnown RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 SIX5Q8N196 739 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 STX18Q9P2W9 335 aaKnown RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 SEL1LQ9UBV2 794 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 PACSIN2Q9UNF0 486 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 WASF2Q9Y6W5 498 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CACNA1FO60840 1977 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 SH3PXD2BA1X283 911 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CCDC162PA2VCL2 907 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CBX6O95503 412 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 ZBED1O96006 694 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 HSPA1LP34931 641 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 KCNMA1Q12791 1236 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 TGFBIQ15582 683 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 NELFCDQ8IXH7 590 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 PRPF31Q8WWY3 499 aaKnown RBP8.39□□□□□ -1.07
COL4A5-205ENST00000483338 MIPEPQ99797 713 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 TLE6Q9H808 572 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 ARHGAP20Q9P2F6 1191 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 CHKBQ9Y259 395 aa8.39□□□□□ -1.07
COL4A5-205ENST00000483338 STRNO43815 780 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 MZF1P28698 734 aaPredicted RBP8.38□□□□□ -1.07
COL4A5-205ENST00000483338 PPP2R5CQ13362 524 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 ACVR2BQ13705 512 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 E2F2Q14209 437 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 TYW1BQ6NUM6 668 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 CCDC174Q6PII3 467 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 INTS8Q75QN2 995 aaKnown RBP8.38□□□□□ -1.07
COL4A5-205ENST00000483338 PAGE5Q96GU1 130 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 AASDHPPTQ9NRN7 309 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 RWDD2AQ9UIY3 292 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 PDS5AQ29RF7 1337 aaKnown RBP8.38□□□□□ -1.07
COL4A5-205ENST00000483338 FAM196BA6NMK8 535 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 SPECC1L-ADORA2AF8WAN1 911 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 PGM3O95394 542 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 AGTP01019 485 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 NUDT17P0C025 328 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 KIF11P52732 1056 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 SNRNP48Q6IEG0 339 aaKnown RBP8.38□□□□□ -1.07
COL4A5-205ENST00000483338 C1orf228Q6PIY5 440 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 TTC39CQ8N584 583 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 GIPC3Q8TF64 312 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 NOX5Q96PH1 765 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 GSDMAQ96QA5 445 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 CRAMP1Q96RY5 1269 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 NEURL2Q9BR09 285 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 CCDC113Q9H0I3 377 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 CLK4Q9HAZ1 481 aaKnown RBP8.38□□□□□ -1.07
COL4A5-205ENST00000483338 MLXIPLQ9NP71 852 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 NDUFA13Q9P0J0 144 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 ZNF212Q9UDV6 495 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 SUGT1Q9Y2Z0 365 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 IVNS1ABPQ9Y6Y0 642 aa8.38□□□□□ -1.07
COL4A5-205ENST00000483338 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 TRAFD1O14545 582 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 CPLX1O14810 134 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 ITGA6P23229 1130 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 PRCPP42785 496 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 DSG1Q02413 1049 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 GFPT1Q06210 699 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 TRIM29Q14134 588 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 EIF4A2Q14240 407 aaKnown RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 ARL13BQ3SXY8 428 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 UBAP2Q5T6F2 1119 aaKnown RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 PLEKHO2Q8TD55 490 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 RAPGEF4Q8WZA2 1011 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 GFM2Q969S9 779 aaKnown RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 ECSITQ9BQ95 431 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 ALG1Q9BT22 464 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 METTL14Q9HCE5 456 aaKnown RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 TELO2Q9Y4R8 837 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 NDUFB9Q9Y6M9 179 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 DCCP43146 1447 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 MYH11P35749 1972 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 FUOMA2VDF0 154 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 GOLGA8BA8MQT2 603 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 EYA4O95677 639 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 LDHCP07864 332 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 CPA3P15088 417 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 TOB1P50616 345 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 COG7P83436 770 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 PAK1Q13153 545 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 GRM2Q14416 872 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 LPIN1Q14693 890 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 SYCP2LQ5T4T6 812 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 RRAGBQ5VZM2 374 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 UNC13DQ70J99 1090 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 TMC4Q7Z404 712 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 LRRC49Q8IUZ0 686 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 GPIHBP1Q8IV16 184 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 PRICKLE1Q96MT3 831 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-205ENST00000483338 KLF18A0A0U1RQI7 1052 aa8.37□□□□□ -1.07
COL4A5-205ENST00000483338 CCDC169A6NNP5 214 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms