RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 NAALADL2Q58DX5 795 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 FAM173BQ6P4H8 233 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 MAEAQ7L5Y9 396 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 SPRED2Q7Z698 418 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 ZNF598Q86UK7 904 aaKnown RBP13.69□□□□□ -0.22
MRPL55-229ENST00000483159 SYT2Q8N9I0 419 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-229ENST00000483159 CCDC51Q96ER9 411 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 CALML4Q96GE6 196 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 IFT74Q96LB3 600 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 ZNF396Q96N95 335 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-229ENST00000483159 PNMA5Q96PV4 448 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 C2orf40Q9H1Z8 148 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 C17orf75Q9HAS0 396 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 KCNG1Q9UIX4 513 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 MTUS1Q9ULD2 1270 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 TTC3P53804 2025 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 COL6A3P12111 3177 aa13.69□□□□□ -0.22
MRPL55-229ENST00000483159 LRRIQ4A6NIV6 560 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 TBKBP1A7MCY6 615 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 TSPAN1O60635 241 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 ZSCAN22P10073 491 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 FGFR1P11362 822 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 GUCY2CP25092 1073 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 NASPP49321 788 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 EFNA5P52803 228 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 ZRSR1Q15695 479 aaKnown RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 FAM187BQ17R55 369 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 CDCA2Q69YH5 1023 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 RINT1Q6NUQ1 792 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 NOTUMQ6P988 496 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 C1orf186Q6ZWK4 172 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 KCNK18Q7Z418 384 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 MRPL10Q7Z7H8 261 aaKnown RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 ZBTB8OSQ8IWT0 167 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 CNNM3Q8NE01 707 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 P2RX5Q93086 422 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 PGBD4Q96DM1 585 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 DRC1Q96MC2 740 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 CASD1Q96PB1 797 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 USP28Q96RU2 1077 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 C11orf84Q9BUA3 381 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 CCSER1Q9C0I3 900 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 FZD8Q9H461 694 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 AAASQ9NRG9 546 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 PRMT7Q9NVM4 692 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 MRPL42Q9Y6G3 142 aaKnown RBP13.68□□□□□ -0.22
MRPL55-229ENST00000483159 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
MRPL55-229ENST00000483159 GBF1Q92538 1859 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 ATF7P17544 494 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-229ENST00000483159 IBSPP21815 317 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-229ENST00000483159 MARCKSP29966 332 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-229ENST00000483159 CTNNB1P35222 781 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 GATMP50440 423 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 SLC12A3P55017 1021 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 CEBPZQ03701 1054 aaKnown RBP13.67□□□□□ -0.22
MRPL55-229ENST00000483159 GPM6BQ13491 265 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 AMHR2Q16671 573 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 PTPROQ16827 1216 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 CSPP1Q1MSJ5 1256 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 PAN2Q504Q3 1202 aaKnown RBP13.67□□□□□ -0.22
MRPL55-229ENST00000483159 ATL3Q6DD88 541 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 CSRNP2Q9H175 543 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 UBN1Q9NPG3 1134 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 RNF19AQ9NV58 838 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
MRPL55-229ENST00000483159 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 HIP1RO75146 1068 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 F13A1P00488 732 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 PLA2G4BP0C869 781 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 GRIN1Q05586 938 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 BECN1Q14457 450 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 MAPK6Q16659 721 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 CLLU1OSQ5K130 101 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 UBXN11Q5T124 520 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 KRI1Q8N9T8 703 aaKnown RBP13.66□□□□□ -0.22
MRPL55-229ENST00000483159 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 BSNDQ8WZ55 320 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 MRPL38Q96DV4 380 aaKnown RBP13.66□□□□□ -0.22
MRPL55-229ENST00000483159 PLIN2Q99541 437 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 NTPCRQ9BSD7 190 aaKnown RBP13.66□□□□□ -0.22
MRPL55-229ENST00000483159 RUSC1Q9BVN2 902 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
MRPL55-229ENST00000483159 LMAN2LQ9H0V9 348 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 TYW1Q9NV66 732 aaKnown RBP13.66□□□□□ -0.22
MRPL55-229ENST00000483159 CCDC39Q9UFE4 941 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 RBM19Q9Y4C8 960 aaKnown RBP13.66□□□□□ -0.22
MRPL55-229ENST00000483159 PCDHB12Q9Y5F1 795 aa13.66□□□□□ -0.22
MRPL55-229ENST00000483159 CNTNAP2Q9UHC6 1331 aa13.65□□□□□ -0.22
MRPL55-229ENST00000483159 CARNS1A5YM72 827 aa13.65□□□□□ -0.22
MRPL55-229ENST00000483159 ACKR2O00590 384 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms