RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ACSF2Q96CM8 615 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-206ENST00000483030 CCDC136Q96JN2 1154 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 SH2D3AQ9BRG2 576 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 FDXACB1Q9BRP7 624 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-206ENST00000483030 GBP3Q9H0R5 595 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 UNC45AQ9H3U1 944 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 TBC1D13Q9NVG8 400 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 INPP5FQ9Y2H2 1132 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 IRAK3Q9Y616 596 aa8.32□□□□□ -1.08
CSDE1-206ENST00000483030 FNDC1Q4ZHG4 1894 aaPredicted RBP8.32□□□□□ -1.08
CSDE1-206ENST00000483030 CCDC196A0A1B0GTZ2 297 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 TMEM150BA6NC51 233 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 PRPF3O43395 683 aaKnown RBP8.31□□□□□ -1.08
CSDE1-206ENST00000483030 ZNF623O75123 536 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 OFD1O75665 1012 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 SSBP05455 408 aaKnown RBP eCLIP8.31□□□□□ -1.08
CSDE1-206ENST00000483030 CPA1P15085 419 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 NPR3P17342 541 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 KLRC2P26717 231 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 SFNP31947 248 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 SLC11A1P49279 550 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 DNM2P50570 870 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 RCAN1P53805 252 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 CDC42EP1Q00587 391 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 AKAP17AQ02040 695 aaKnown RBP8.31□□□□□ -1.08
CSDE1-206ENST00000483030 TDGQ13569 410 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 PTPN14Q15678 1187 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 TSGA10IPQ3SY00 556 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 MTERF2Q49AM1 385 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 LRCH2Q5VUJ6 765 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
CSDE1-206ENST00000483030 CCDC149Q6ZUS6 474 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 OTOP3Q7RTS5 596 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 PPFIBP1Q86W92 1011 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 ZNF280BQ86YH2 543 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 RHPN2Q8IUC4 686 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 KSR1Q8IVT5 923 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 ADSSL1Q8N142 457 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 SLC5A5Q92911 643 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 PHKBQ93100 1093 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 KLHL5Q96PQ7 755 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 CEP89Q96ST8 783 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 RIT2Q99578 217 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 TRAIPQ9BWF2 469 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 VN1R3Q9BXE9 311 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 NIFKQ9BYG3 293 aaKnown RBP8.31□□□□□ -1.08
CSDE1-206ENST00000483030 KCNK12Q9HB15 430 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 FAM105AQ9NUU6 356 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 SUCLA2Q9P2R7 463 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-206ENST00000483030 DNAJB4Q9UDY4 337 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
CSDE1-206ENST00000483030 FBXL21Q9UKT6 434 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 PIN4Q9Y237 131 aaKnown RBP8.31□□□□□ -1.08
CSDE1-206ENST00000483030 KMT2EQ8IZD2 1858 aa8.31□□□□□ -1.08
CSDE1-206ENST00000483030 RIF1Q5UIP0 2472 aaKnown RBP8.3□□□□□ -1.08
CSDE1-206ENST00000483030 CFAP54Q96N23 3096 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 IGKV6-21A0A0C4DH24 114 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 CARNS1A5YM72 827 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 DDX11L8A8MPP1 907 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 STK25O00506 426 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 B4GALT3O60512 393 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 STBD1O95210 358 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 ALDH2P05091 517 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
CSDE1-206ENST00000483030 CNPP09543 421 aaKnown RBP8.3□□□□□ -1.08
CSDE1-206ENST00000483030 SKIP12755 728 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 AOC1P19801 751 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 SFPQP23246 707 aaKnown RBP eCLIP8.3□□□□□ -1.08
CSDE1-206ENST00000483030 ID4P47928 161 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 USP11P51784 963 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 JAK3P52333 1124 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 KRT32Q14532 448 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 XKR3Q5GH77 459 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 AGMOQ6ZNB7 445 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 Q6ZUG5 572 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 CATSPER4Q7RTX7 472 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 MIER3Q7Z3K6 550 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 SIX5Q8N196 739 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 DTWD2Q8NBA8 298 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 BICD2Q8TD16 824 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 RSPH1Q8WYR4 309 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 BRF1Q92994 677 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 TEKT3Q9BXF9 490 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 EMILIN2Q9BXX0 1053 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 INO80BQ9C086 356 aaPredicted RBP8.3□□□□□ -1.08
CSDE1-206ENST00000483030 SFXN1Q9H9B4 322 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 PCDHB2Q9Y5E7 798 aa8.3□□□□□ -1.08
CSDE1-206ENST00000483030 LOXHD1Q8IVV2 1947 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 C2CD2LO14523 706 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 NARSO43776 548 aaKnown RBP8.29□□□□□ -1.08
CSDE1-206ENST00000483030 LILRB3O75022 631 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 MAFO75444 373 aaPredicted RBP8.29□□□□□ -1.08
CSDE1-206ENST00000483030 PSMD10O75832 226 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 DDHD2O94830 711 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 MYBP10242 640 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 RAB27AP51159 221 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 CLCN4P51793 760 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 AFF1P51825 1210 aaKnown RBP8.29□□□□□ -1.08
CSDE1-206ENST00000483030 ANGPT1Q15389 498 aa8.29□□□□□ -1.08
CSDE1-206ENST00000483030 LETM2Q2VYF4 491 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms