RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ENTPD7Q9NQZ7 604 aa22.13■■□□□ 1.13
MSH5-215ENST00000482280 SPG21Q9NZD8 308 aa22.13■■□□□ 1.13
MSH5-215ENST00000482280 STK24Q9Y6E0 443 aa22.13■■□□□ 1.13
MSH5-215ENST00000482280 CUL9Q8IWT3 2517 aa22.13■■□□□ 1.13
MSH5-215ENST00000482280 INO80B-WBP1J3KQ70 363 aa22.12■■□□□ 1.13
MSH5-215ENST00000482280 USO1O60763 962 aaKnown RBP22.12■■□□□ 1.13
MSH5-215ENST00000482280 SRGAP2BP0DMP2 458 aa22.12■■□□□ 1.13
MSH5-215ENST00000482280 RARRES1P49788 294 aa22.12■■□□□ 1.13
MSH5-215ENST00000482280 CLLU1OSQ5K130 101 aa22.12■■□□□ 1.13
MSH5-215ENST00000482280 ZNF598Q86UK7 904 aaKnown RBP22.12■■□□□ 1.13
MSH5-215ENST00000482280 LZTS1Q9Y250 596 aa22.12■■□□□ 1.13
MSH5-215ENST00000482280 INPP5FQ9Y2H2 1132 aa22.12■■□□□ 1.13
MSH5-215ENST00000482280 DNAJB1P25685 340 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 AXLP30530 894 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 SSTR3P32745 418 aaPredicted RBP22.11■■□□□ 1.13
MSH5-215ENST00000482280 NRIP1P48552 1158 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 LONRF3Q496Y0 759 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 RBM23Q86U06 439 aaKnown RBP22.11■■□□□ 1.13
MSH5-215ENST00000482280 TMEM87AQ8NBN3 555 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 CNNM3Q8NE01 707 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 MCPH1Q8NEM0 835 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.11■■□□□ 1.13
MSH5-215ENST00000482280 MRPS27Q92552 414 aaKnown RBP22.11■■□□□ 1.13
MSH5-215ENST00000482280 POLR3CQ9BUI4 534 aaPredicted RBP22.11■■□□□ 1.13
MSH5-215ENST00000482280 HCSTQ9UBK5 93 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 PCDHB2Q9Y5E7 798 aa22.11■■□□□ 1.13
MSH5-215ENST00000482280 ARHGEF35A5YM69 484 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 GRXCR2A6NFK2 248 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 CA8P35219 290 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 IRS1P35568 1242 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 PLCB3Q01970 1234 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 CAMK1Q14012 370 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 NOMO2Q5JPE7 1267 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 NOTUMQ6P988 496 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 CATSPER3Q86XQ3 398 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 HACE1Q8IYU2 909 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 LPPQ93052 612 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 TMEM169Q96HH4 297 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 TMX3Q96JJ7 454 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 FAM193BQ96PV7 902 aaPredicted RBP22.1■■□□□ 1.13
MSH5-215ENST00000482280 TRIM6Q9C030 488 aaPredicted RBP22.1■■□□□ 1.13
MSH5-215ENST00000482280 POLR3FQ9H1D9 316 aaPredicted RBP22.1■■□□□ 1.13
MSH5-215ENST00000482280 NGRNQ9NPE2 291 aaKnown RBP22.1■■□□□ 1.13
MSH5-215ENST00000482280 RNF19AQ9NV58 838 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 LRWD1Q9UFC0 647 aa22.1■■□□□ 1.13
MSH5-215ENST00000482280 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.1■■□□□ 1.13
MSH5-215ENST00000482280 ZNF623O75123 536 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 ZC3H11AO75152 810 aaKnown RBP eCLIP22.09■■□□□ 1.13
MSH5-215ENST00000482280 ATF7P17544 494 aaPredicted RBP22.09■■□□□ 1.13
MSH5-215ENST00000482280 U2AF2P26368 475 aaKnown RBP eCLIP22.09■■□□□ 1.132e-11■■■■■ 47.8
MSH5-215ENST00000482280 RPA1P27694 616 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 CCT6AP40227 531 aaKnown RBP22.09■■□□□ 1.13
MSH5-215ENST00000482280 PTENP60484 403 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 POU5F1BQ06416 359 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 COL19A1Q14993 1142 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 LRRC55Q6ZSA7 311 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 MAEAQ7L5Y9 396 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 TMC7Q7Z402 723 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 EFHBQ8N7U6 833 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 CCDC51Q96ER9 411 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 CDCA3Q99618 268 aaPredicted RBP22.09■■□□□ 1.13
MSH5-215ENST00000482280 TCF25Q9BQ70 676 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 UBN1Q9NPG3 1134 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 XPNPEP1Q9NQW7 623 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 KANSL3Q9P2N6 904 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 DBR1Q9UK59 544 aaKnown RBP22.09■■□□□ 1.13
MSH5-215ENST00000482280 SMC3Q9UQE7 1217 aa22.09■■□□□ 1.13
MSH5-215ENST00000482280 FNDC1Q4ZHG4 1894 aaPredicted RBP22.09■■□□□ 1.13
MSH5-215ENST00000482280 CNTNAP2Q9UHC6 1331 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 LRRIQ4A6NIV6 560 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 LAD1O00515 517 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 MED24O75448 989 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 IL9P15248 144 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 MUTP22033 750 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 CLUL1Q15846 466 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 TMEM132AQ24JP5 1023 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 CTC1Q2NKJ3 1217 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 PLPP4Q5VZY2 271 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 ADGRD2Q7Z7M1 963 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 ZBTB8OSQ8IWT0 167 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 MINDY3Q9H8M7 445 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 CD207Q9UJ71 328 aa22.08■■□□□ 1.13
MSH5-215ENST00000482280 TCF20Q9UGU0 1960 aaKnown RBP22.07■■□□□ 1.12
MSH5-215ENST00000482280 A0A087WWV3 80 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 SPATA31C1P0DKV0 1188 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 GJB2P29033 226 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 GTF2F1P35269 517 aaKnown RBP eCLIP22.07■■□□□ 1.12
MSH5-215ENST00000482280 ARL2P36404 184 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 PBX3P40426 434 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 FXR2P51116 673 aaKnown RBP eCLIP22.07■■□□□ 1.12
MSH5-215ENST00000482280 BCAR1P56945 870 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 ADAM15Q13444 863 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 CAPSQ13938 189 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 RILPL1Q5EBL4 403 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 POTEGQ6S5H5 508 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 TBC1D32Q96NH3 1257 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 GBP3Q9H0R5 595 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 RSAD1Q9HA92 442 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 KIAA1671Q9BY89 1806 aa22.07■■□□□ 1.12
MSH5-215ENST00000482280 ITGA4P13612 1032 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms