RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	RBM23	Q86U06	439 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ZNF598	Q86UK7	904 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FERMT3	Q86UX7	667 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	GJD3	Q8N144	294 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	RNF149	Q8NC42	400 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	HELQ	Q8TDG4	1101 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	MRPS27	Q92552	414 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CDCA3	Q99618	268 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CWH43	Q9H720	699 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	IFT122	Q9HBG6	1241 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NGRN	Q9NPE2	291 aa	Known RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FAM105A	Q9NUU6	356 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PRKAG3	Q9UGI9	489 aa		13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	COL4A4	P53420	1690 aa	Predicted RBP	13.72	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ZBTB39	O15060	712 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ZNF623	O75123	536 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	IRS1	P35568	1242 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TEC	P42680	631 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ST3GAL1	Q11201	340 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ZNF174	Q15697	407 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CLLU1OS	Q5K130	101 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	LRRC55	Q6ZSA7	311 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NOSTRIN	Q8IVI9	506 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	FAM178B	Q8IXR5	827 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	EFHB	Q8N7U6	833 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TMEM87A	Q8NBN3	555 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	URGCP	Q8TCY9	931 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	NACC1	Q96RE7	527 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	KIF2C	Q99661	725 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	TUFT1	Q9NNX1	390 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	ENTPD7	Q9NQZ7	604 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	AGPAT5	Q9NUQ2	364 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	CD207	Q9UJ71	328 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	PCDHB2	Q9Y5E7	798 aa		13.71	□□□□□ -0.21
CDK5RAP2-211	ENST00000479584	INO80B-WBP1	J3KQ70	363 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	OR52Z1	P0C646	297 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	IL9	P15248	144 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	AXL	P30530	894 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	LTBR	P36941	435 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	POU5F1B	Q06416	359 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	CLUL1	Q15846	466 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	NOMO2	Q5JPE7	1267 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	TTC38	Q5R3I4	469 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	TMC7	Q7Z402	723 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	HACE1	Q8IYU2	909 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	CNNM3	Q8NE01	707 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	PIGO	Q8TEQ8	1089 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	TMEM169	Q96HH4	297 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	POP1	Q99575	1024 aa	Known RBP	13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	TCF25	Q9BQ70	676 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	RAB34	Q9BZG1	259 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	TMEM60	Q9H2L4	133 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	UBN1	Q9NPG3	1134 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	RNF19A	Q9NV58	838 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	KANSL3	Q9P2N6	904 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	STK24	Q9Y6E0	443 aa		13.7	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	BRWD1	Q9NSI6	2320 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	POTEM	A6NI47	508 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	MCM2	P49736	904 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	BCAR1	P56945	870 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	PTEN	P60484	403 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	ERVFC1	P60507	584 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	SMAD4	Q13485	552 aa	Known RBP	13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	LONRF3	Q496Y0	759 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	HAUS3	Q68CZ6	603 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	NOTUM	Q6P988	496 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	ADGRD2	Q7Z7M1	963 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	MCPH1	Q8NEM0	835 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	LPP	Q93052	612 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	CCDC51	Q96ER9	411 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	FAM193B	Q96PV7	902 aa	Predicted RBP	13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	TRIM6	Q9C030	488 aa	Predicted RBP	13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	HCST	Q9UBK5	93 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	STK39	Q9UEW8	545 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	INPP5F	Q9Y2H2	1132 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	MYO7A	Q13402	2215 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	RALGAPA2	Q2PPJ7	1873 aa		13.69	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	CNTNAP2	Q9UHC6	1331 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	WNT7A	O00755	349 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	PER2	O15055	1255 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	LINC01565	O15544	149 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	ALAD	P13716	330 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	ATF7	P17544	494 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	RPA1	P27694	616 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	CA8	P35219	290 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	ARL2	P36404	184 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	RARRES1	P49788	294 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	DLX2	Q07687	328 aa	Predicted RBP	13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	SMC1A	Q14683	1233 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	PLPP4	Q5VZY2	271 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	MRPL10	Q7Z7H8	261 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	CATSPER3	Q86XQ3	398 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	ADHFE1	Q8IWW8	467 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	MINDY3	Q9H8M7	445 aa		13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	DBR1	Q9UK59	544 aa	Known RBP	13.68	□□□□□ -0.22
CDK5RAP2-211	ENST00000479584	MUC3A	Q02505	3323 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms