RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 STBD1O95210 358 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 SSBP05455 408 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDLBP-237ENST00000479169 SLC11A1P49279 550 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 CLCN5P51795 746 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 JAK3P52333 1124 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 RNASELQ05823 741 aaKnown RBP12.39□□□□□ -0.43
HDLBP-237ENST00000479169 GLB1LQ6UWU2 654 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 KSR1Q8IVT5 923 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 BRF1Q92994 677 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 RIT2Q99578 217 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 TEKT3Q9BXF9 490 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 SFXN1Q9H9B4 322 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 CYP26B1Q9NR63 512 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 CHST12Q9NRB3 414 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 FAM105AQ9NUU6 356 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 NID2Q14112 1375 aa12.39□□□□□ -0.43
HDLBP-237ENST00000479169 MTCL1Q9Y4B5 1905 aaKnown RBP12.39□□□□□ -0.43
HDLBP-237ENST00000479169 IGKV6-21A0A0C4DH24 114 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 PI15O43692 258 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 PSMD10O75832 226 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 NPR3P17342 541 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 SFPQP23246 707 aaKnown RBP eCLIP12.38□□□□□ -0.43
HDLBP-237ENST00000479169 SFNP31947 248 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 AFF1P51825 1210 aaKnown RBP12.38□□□□□ -0.43
HDLBP-237ENST00000479169 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
HDLBP-237ENST00000479169 KRT32Q14532 448 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 NTRK3Q16288 839 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 CCDC149Q6ZUS6 474 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 CATSPER4Q7RTX7 472 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 MIER3Q7Z3K6 550 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 GPR149Q86SP6 731 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 ZNF280BQ86YH2 543 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 RHPN2Q8IUC4 686 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 BICD2Q8TD16 824 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 NLRP4Q96MN2 994 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 TRAIPQ9BWF2 469 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 SLC26A6Q9BXS9 759 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 NIFKQ9BYG3 293 aaKnown RBP12.38□□□□□ -0.43
HDLBP-237ENST00000479169 SUCLA2Q9P2R7 463 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-237ENST00000479169 ARID2Q68CP9 1835 aa12.38□□□□□ -0.43
HDLBP-237ENST00000479169 CACNA1AO00555 2505 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 DDX11L8A8MPP1 907 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 DDHD2O94830 711 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 TDP2O95551 362 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 HMGB1P09429 215 aaKnown RBP12.37□□□□□ -0.43
HDLBP-237ENST00000479169 CNPP09543 421 aaKnown RBP12.37□□□□□ -0.43
HDLBP-237ENST00000479169 KLRC2P26717 231 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 DNM2P50570 870 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 USP11P51784 963 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 CLCN4P51793 760 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 GIT2Q14161 759 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 XKR3Q5GH77 459 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 PLA2G4FQ68DD2 849 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 AGMOQ6ZNB7 445 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 CCDC148Q8NFR7 591 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 TBCKQ8TEA7 893 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 NKD2Q969F2 451 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-237ENST00000479169 ACSF2Q96CM8 615 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-237ENST00000479169 JAKMIP1Q96N16 626 aaKnown RBP12.37□□□□□ -0.43
HDLBP-237ENST00000479169 KLHL5Q96PQ7 755 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 NCOA5Q9HCD5 579 aaKnown RBP12.37□□□□□ -0.43
HDLBP-237ENST00000479169 PCDHB2Q9Y5E7 798 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 CACNA1IQ9P0X4 2223 aa12.37□□□□□ -0.43
HDLBP-237ENST00000479169 NARSO43776 548 aaKnown RBP12.36□□□□□ -0.43
HDLBP-237ENST00000479169 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
HDLBP-237ENST00000479169 ZNF623O75123 536 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 MYBP10242 640 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 SKIP12755 728 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 RAB27AP51159 221 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 CCT2P78371 535 aaKnown RBP12.36□□□□□ -0.43
HDLBP-237ENST00000479169 TDGQ13569 410 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 B3GNT9Q6UX72 402 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 OTOP3Q7RTS5 596 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 PPFIBP1Q86W92 1011 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 ADSSL1Q8N142 457 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 SIX5Q8N196 739 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 RDM1Q8NG50 284 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 EMILIN2Q9BXX0 1053 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 RNF26Q9BY78 433 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-237ENST00000479169 KCNK12Q9HB15 430 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 IFT122Q9HBG6 1241 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 AGPAT5Q9NUQ2 364 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 DUSP12Q9UNI6 340 aa12.36□□□□□ -0.43
HDLBP-237ENST00000479169 FANCMQ8IYD8 2048 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 C2CD2LO14523 706 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 LILRB3O75022 631 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 MAFO75444 373 aaPredicted RBP12.35□□□□□ -0.43
HDLBP-237ENST00000479169 POMCP01189 267 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 AOC1P19801 751 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 NPEPPSP55786 919 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 NLRP5P59047 1200 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 CDC42EP1Q00587 391 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 LETM2Q2VYF4 491 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 Q4G0T1 1027 aa12.35□□□□□ -0.43
HDLBP-237ENST00000479169 BLOC1S2Q6QNY1 142 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms