RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ADAM17P78536 824 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 MRPS6P82932 125 aaKnown RBP8.26□□□□□ -1.09
BRCA1-214ENST00000477152 KRT32Q14532 448 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 PLPPR4Q7Z2D5 763 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 HEATR3Q7Z4Q2 680 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 CMTR2Q8IYT2 770 aaKnown RBP8.26□□□□□ -1.09
BRCA1-214ENST00000477152 NEK9Q8TD19 979 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 CCDC12Q8WUD4 166 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-214ENST00000477152 P2RX5Q93086 422 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 CLDND1Q9NY35 253 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 TRPV2Q9Y5S1 764 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 UBIAD1Q9Y5Z9 338 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 NFASCO94856 1347 aa8.26□□□□□ -1.09
BRCA1-214ENST00000477152 MBLAC1A4D2B0 266 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-214ENST00000477152 PDGFAP04085 211 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
BRCA1-214ENST00000477152 KCNA2P16389 499 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 STAT5BP51692 787 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 NAPAP54920 295 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 FGD1P98174 961 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 PAK2Q13177 524 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 AP3B2Q13367 1082 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 TCEAL5Q5H9L2 206 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 ALKBH2Q6NS38 261 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-214ENST00000477152 DNAJB3Q8WWF6 145 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 MXRA8Q9BRK3 442 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 RUBCNLQ9H714 662 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 DMGDHQ9UI17 866 aaKnown RBP8.25□□□□□ -1.09
BRCA1-214ENST00000477152 SUPT16HQ9Y5B9 1047 aaKnown RBP8.25□□□□□ -1.09
BRCA1-214ENST00000477152 PCDHA2Q9Y5H9 948 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 CDY2AQ9Y6F7 541 aa8.25□□□□□ -1.09
BRCA1-214ENST00000477152 SMIM35A0A1B0GVV1 85 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-214ENST00000477152 GSTTP1A0A1W2PQM5 241 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 ENPP3O14638 875 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 DCXO43602 365 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 HBP1O60381 514 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 CHRNA1P02708 482 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 MARK3P27448 753 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 ADCY7P51828 1080 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 ANTXR2P58335 489 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 IGBP1P78318 339 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 LPIN1Q14693 890 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 PKN1Q16512 942 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 TCTN1Q2MV58 587 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 FBXO47Q5MNV8 452 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 PDE12Q6L8Q7 609 aaKnown RBP8.24□□□□□ -1.09
BRCA1-214ENST00000477152 TMTC3Q6ZXV5 915 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 SGMS1Q86VZ5 419 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 ADHFE1Q8IWW8 467 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 SRBD1Q8N5C6 995 aaKnown RBP8.24□□□□□ -1.09
BRCA1-214ENST00000477152 MYL10Q9BUA6 226 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 C1orf112Q9NSG2 853 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 ZDHHC3Q9NYG2 299 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 CEP131Q9UPN4 1083 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 PCDHB7Q9Y5E2 793 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 PCDHB12Q9Y5F1 795 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 COL1A2P08123 1366 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 SLC27A2O14975 620 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 ZBTB43O43298 467 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 MMP1P03956 469 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 INSRRP14616 1297 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 RCAN1P53805 252 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 KRT76Q01546 638 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 AKAP17AQ02040 695 aaKnown RBP8.24□□□□□ -1.09
BRCA1-214ENST00000477152 MGAT3Q09327 533 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 BMS1Q14692 1282 aaKnown RBP8.24□□□□□ -1.09
BRCA1-214ENST00000477152 SPOUT1Q5T280 376 aaKnown RBP8.24□□□□□ -1.09
BRCA1-214ENST00000477152 MIS18BP1Q6P0N0 1132 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 NIPA1Q7RTP0 329 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 MRRFQ96E11 262 aaKnown RBP8.24□□□□□ -1.09
BRCA1-214ENST00000477152 MFSD14AQ96MC6 490 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 NEK1Q96PY6 1258 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 UIMC1Q96RL1 719 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 CELF4Q9BZC1 486 aaKnown RBP8.24□□□□□ -1.09
BRCA1-214ENST00000477152 NIF3L1Q9GZT8 377 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 IL25Q9H293 177 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 SENP2Q9HC62 589 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 RIC8AQ9NPQ8 531 aa8.24□□□□□ -1.09
BRCA1-214ENST00000477152 DENND3A2RUS2 1198 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 DGKIO75912 1065 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 PLEKHA8P1O95397 391 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 SCG2P13521 617 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 IL9P15248 144 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 ITGB5P18084 799 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 MAPK8P45983 427 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 NDUFV1P49821 464 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 TTC3P53804 2025 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 SETQ01105 290 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-214ENST00000477152 UBE3AQ05086 875 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 SMAD4Q13485 552 aaKnown RBP8.23□□□□□ -1.09
BRCA1-214ENST00000477152 SLC35G1Q2M3R5 365 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 C8orf34Q49A92 452 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 CEP55Q53EZ4 464 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 ZNF484Q5JVG2 852 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 CREB3L3Q68CJ9 461 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 SPRED2Q7Z698 418 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 MICU3Q86XE3 530 aa8.23□□□□□ -1.09
BRCA1-214ENST00000477152 BICD2Q8TD16 824 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms