RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
NUP188-205ENST00000477069 MCM3P25205 808 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 ADSSP30520 456 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 VAMP7P51809 220 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 MAP4K3Q8IVH8 894 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 XXYLT1Q8NBI6 393 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 BSNDQ8WZ55 320 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 PSMB7Q99436 277 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 NTPCRQ9BSD7 190 aaKnown RBP12.51□□□□□ -0.41
NUP188-205ENST00000477069 RNF14Q9UBS8 474 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 SNCAIPQ9Y6H5 919 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 FTCDO95954 541 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 NPTX2P47972 431 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 CASP8Q14790 479 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 KIF22Q14807 665 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 FAM102BQ5T8I3 360 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 DNAAF5Q86Y56 855 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 RDH13Q8NBN7 331 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 IWS1Q96ST2 819 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 TMOD4Q9NZQ9 345 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
NUP188-205ENST00000477069 MYH9P35579 1960 aaKnown RBP12.51□□□□□ -0.41
NUP188-205ENST00000477069 ZNFX1Q9P2E3 1918 aaKnown RBP12.5□□□□□ -0.41
NUP188-205ENST00000477069 H3BQF6 201 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 CES2O00748 559 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 ADRB2P07550 413 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 KRT13P13646 458 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 NAP1L1P55209 391 aaKnown RBP12.5□□□□□ -0.41
NUP188-205ENST00000477069 ABHD15Q6UXT9 468 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
NUP188-205ENST00000477069 SLFN11Q7Z7L1 901 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 CCDC43Q96MW1 224 aaKnown RBP12.5□□□□□ -0.41
NUP188-205ENST00000477069 GABBR1Q9UBS5 961 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 NCANO14594 1321 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 IGSF9BQ9UPX0 1349 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
NUP188-205ENST00000477069 N4BP1O75113 896 aaKnown RBP12.5□□□□□ -0.41
NUP188-205ENST00000477069 MYBL2P10244 700 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 OAS2P29728 719 aaKnown RBP12.5□□□□□ -0.41
NUP188-205ENST00000477069 MS4A14Q96JA4 679 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 LRRC1Q9BTT6 524 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 C17orf75Q9HAS0 396 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 JPH1Q9HDC5 661 aaPredicted RBP12.5□□□□□ -0.41
NUP188-205ENST00000477069 HOXC10Q9NYD6 342 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 TCEAL9Q9UHQ7 104 aa12.5□□□□□ -0.41
NUP188-205ENST00000477069 ANKRD63C9JTQ0 380 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 RTP1P59025 263 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 FAM193AP78312 1265 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 SUPT20HL1Q3ZLR7 823 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 SLC39A4Q6P5W5 647 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 CCNI2Q6ZMN8 369 aaPredicted RBP12.49□□□□□ -0.41
NUP188-205ENST00000477069 VPS36Q86VN1 386 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 FMNL3Q8IVF7 1028 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 CCDC60Q8IWA6 550 aaPredicted RBP12.49□□□□□ -0.41
NUP188-205ENST00000477069 TPCN2Q8NHX9 752 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 HDAC7Q8WUI4 952 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 KIFAP3Q92845 792 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 ATP6V0A1Q93050 837 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 CDHR1Q96JP9 859 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 LRRN2O75325 713 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 PSAPP07602 524 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 VGLL4Q14135 290 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 CFAP221Q4G0U5 840 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 OTUD6AQ7L8S5 288 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 ARHGEF19Q8IW93 802 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 FBXL18Q96ME1 805 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 KIFC3Q9BVG8 833 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 XPNPEP1Q9NQW7 623 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 RBM12Q9NTZ6 932 aaKnown RBP12.49□□□□□ -0.41
NUP188-205ENST00000477069 SLC9A2Q9UBY0 812 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 PACSIN2Q9UNF0 486 aaPredicted RBP12.49□□□□□ -0.41
NUP188-205ENST00000477069 STXBP5LQ9Y2K9 1186 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 ADGRA3Q8IWK6 1321 aa12.49□□□□□ -0.41
NUP188-205ENST00000477069 ZC3H4Q9UPT8 1303 aaKnown RBP12.49□□□□□ -0.41
NUP188-205ENST00000477069 H2AFZP0C0S5 128 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 LMNB1P20700 586 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 ICAM3P32942 547 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 ACTR2P61160 394 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 SP2Q02086 613 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 DMP1Q13316 513 aaPredicted RBP12.48□□□□□ -0.41
NUP188-205ENST00000477069 H2AFVQ71UI9 128 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 TMEM117Q9H0C3 514 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 VIPAS39Q9H9C1 493 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 DKC1O60832 514 aaKnown RBP eCLIP12.48□□□□□ -0.414e-9■■■■□ 22.5
NUP188-205ENST00000477069 ZMYND10O75800 440 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 SOX10P56693 466 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 IFI16Q16666 785 aaKnown RBP12.48□□□□□ -0.41
NUP188-205ENST00000477069 TREML2Q5T2D2 321 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 CCDC181Q5TID7 509 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 SWSAP1Q6NVH7 229 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 GLYCTKQ8IVS8 523 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 CHST13Q8NET6 341 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 AENQ8WTP8 325 aaKnown RBP12.48□□□□□ -0.41
NUP188-205ENST00000477069 U2AF1L4Q8WU68 220 aaKnown RBP12.48□□□□□ -0.41
NUP188-205ENST00000477069 KCNN1Q92952 543 aa12.48□□□□□ -0.41
NUP188-205ENST00000477069 CEP170P1Q96L14 293 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms