RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 MYH9P35579 1960 aaKnown RBP16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 GLTPD2A6NH11 291 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 MAPK13O15264 365 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 UBA1P22314 1058 aaKnown RBP16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 PRKCIP41743 596 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 RTP1P59025 263 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 TUBB4BP68371 445 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 ZNF526Q8TF50 670 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 STK33Q9BYT3 514 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 TXNRD2Q9NNW7 524 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 XPNPEP1Q9NQW7 623 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 RBPJLQ9UBG7 517 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 EMSYQ7Z589 1322 aa16.73■□□□□ 0.27
RPUSD3-215ENST00000475470 ANKRD63C9JTQ0 380 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 N4BP1O75113 896 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 OATP04181 439 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 FERP16591 822 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 CNGA1P29973 690 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 COPB2P35606 906 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 POLGP54098 1239 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 NEDD9Q14511 834 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 EEPD1Q7L9B9 569 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 RNF10Q8N5U6 811 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 NOX5Q96PH1 765 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 POLR3FQ9H1D9 316 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 TAF1DQ9H5J8 278 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 GOLGA8IPA6NC78 632 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 GOLGA8JA6NMD2 632 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 SRGAP2O75044 1071 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 ATP4AP20648 1035 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 MOGSQ13724 837 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 KIAA0753Q2KHM9 967 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 VPS36Q86VN1 386 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 ZSWIM2Q8NEG5 633 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 APEX2Q9UBZ4 518 aa16.72■□□□□ 0.27
RPUSD3-215ENST00000475470 IQCA1LA6NCM1 817 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 TULP1O00294 542 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 GFPT2O94808 682 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 FARP2O94887 1054 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 PGK2P07205 417 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 TGFB3P10600 412 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 KCTD2Q14681 263 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 DRAP1Q14919 205 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 EMC2Q15006 297 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 Q3C1V9 767 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 C10orf76Q5T2E6 689 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 R3HDMLQ9H3Y0 253 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 KCNG1Q9UIX4 513 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 SALL4Q9UJQ4 1053 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 DAAM1Q9Y4D1 1078 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 F8VZ95 297 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 H0YCG3 227 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 BUB1O43683 1085 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 PNMA6AP0CW24 399 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 ANXA13P27216 316 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 ADSSP30520 456 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 SOX5P35711 763 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 GCLMP48507 274 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 CLCN6P51797 869 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 PPP3CAQ08209 521 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 GPR162Q16538 588 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 SNRNP35Q16560 246 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 WDR78Q5VTH9 848 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 MMP19Q99542 508 aa16.71■□□□□ 0.27
RPUSD3-215ENST00000475470 IGKV6D-21A0A0A0MT36 114 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 P4HA2O15460 535 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 NAB2Q15742 525 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 FMNL3Q8IVF7 1028 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 SLC10A4Q96EP9 437 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 CAPZA3Q96KX2 299 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 ADGRA3Q8IWK6 1321 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 GSTTP1A0A1W2PQM5 241 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 GGPS1O95749 300 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 ZSCAN20P17040 1043 aaPredicted RBP16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 ABCD1P33897 745 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 CKAP4Q07065 602 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 SNAPC2Q13487 334 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 GPAT2Q6NUI2 795 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 CBWD2Q8IUF1 395 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 POMGNT1Q8WZA1 660 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 BICD1Q96G01 975 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 PARD6BQ9BYG5 372 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 SNX12Q9UMY4 172 aa16.7■□□□□ 0.26
RPUSD3-215ENST00000475470 HNRNPDLO14979 420 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 EVI5O60447 810 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 ADRB2P07550 413 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 CCDC172P0C7W6 258 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 RFX1P22670 979 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 KLRC1P26715 233 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 LY6KQ17RY6 165 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 LDLRAD1Q5T700 205 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 FAM160B1Q5W0V3 765 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 PHLDB3Q6NSJ2 640 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 PNMA8AQ86V59 439 aaPredicted RBP16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 LMO3Q8TAP4 145 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 PLEKHO2Q8TD55 490 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 SLC7A3Q8WY07 619 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 TMEM143Q96AN5 459 aa16.69■□□□□ 0.26
RPUSD3-215ENST00000475470 PACSIN1Q9BY11 444 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms