RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 FLT3LGP49771 235 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 COPB1P53618 953 aaKnown RBP7.28□□□□□ -1.24
ATG4A-207ENST00000474825 SP4Q02446 784 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 POU5F1BQ06416 359 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 ENPEPQ07075 957 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 KCNA1Q09470 495 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 KCNJ12Q14500 433 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 EMC2Q15006 297 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 PKN2Q16513 984 aaKnown RBP7.28□□□□□ -1.24
ATG4A-207ENST00000474825 MIIPQ5JXC2 388 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 GJC2Q5T442 439 aaPredicted RBP7.28□□□□□ -1.24
ATG4A-207ENST00000474825 MAP3K21Q5TCX8 1036 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 IER5Q5VY09 327 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 HAUS6Q7Z4H7 955 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 VSTM4Q8IW00 320 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 TRIM59Q8IWR1 403 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 TRPV1Q8NER1 839 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 BSNDQ8WZ55 320 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 CNOT6LQ96LI5 555 aaKnown RBP7.28□□□□□ -1.24
ATG4A-207ENST00000474825 TSG101Q99816 390 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 JPH2Q9BR39 696 aaPredicted RBP7.28□□□□□ -1.24
ATG4A-207ENST00000474825 MKNK1Q9BUB5 465 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 ARHGAP39Q9C0H5 1083 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 UPF3AQ9H1J1 476 aaKnown RBP7.28□□□□□ -1.24
ATG4A-207ENST00000474825 RNPEPQ9H4A4 650 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 TMEM134Q9H6X4 195 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 GPRC5CQ9NQ84 441 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 TBC1D7Q9P0N9 293 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 FAM184BQ9ULE4 1060 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 GABRQQ9UN88 632 aa7.28□□□□□ -1.24
ATG4A-207ENST00000474825 CETN3O15182 167 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 MAPK13O15264 365 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 SLC16A3O15427 465 aaKnown RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 MAGEB2O15479 319 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TEX33O43247 280 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 CALUO43852 315 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 SORBS3O60504 671 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 DUSP11O75319 330 aaKnown RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TBC1D8O95759 1140 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 PTGS1P23219 599 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 GLRA2P23416 452 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 RPL13P26373 211 aaKnown RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 HOXC8P31273 242 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 DNM2P50570 870 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 SMTNP53814 917 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 POLGP54098 1239 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 PRMT2P55345 433 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 PEX3P56589 373 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 GJA9P57773 515 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 ADAM17P78536 824 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 MLLT1Q03111 559 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 DMP1Q13316 513 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 PPP2R5AQ15172 486 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 DGKDQ16760 1214 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TPD52L1Q16890 204 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 MTERF2Q49AM1 385 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 ZC2HC1CQ53FD0 456 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 PRAMEF19Q5SWL8 479 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 FAM102BQ5T8I3 360 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 MFSD14CQ5VZR4 134 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 CDCA2Q69YH5 1023 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TAS1R3Q7RTX0 852 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 FRMD5Q7Z6J6 570 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 CTU1Q7Z7A3 348 aaKnown RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TRIM50Q86XT4 487 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 ANKRD20A12PQ8NF67 263 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 OR6J1Q8NGC5 347 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 PXYLP1Q8TE99 480 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TCP11Q8WWU5 503 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 SLC7A3Q8WY07 619 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TRIB2Q92519 343 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 KAT2BQ92831 832 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 GLG1Q92896 1179 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 CCDC43Q96MW1 224 aaKnown RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 ACCSQ96QU6 501 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 SH2D3AQ9BRG2 576 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TUBGCP2Q9BSJ2 902 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 NFKBIZQ9BYH8 718 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 GBP3Q9H0R5 595 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 ZHX3Q9H4I2 956 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 POLD4Q9HCU8 107 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 AGPAT3Q9NRZ7 376 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 SRRDQ9UH36 339 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 ZHX1Q9UKY1 873 aaPredicted RBP7.27□□□□□ -1.25
ATG4A-207ENST00000474825 TBX20Q9UMR3 447 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 STYXL1Q9Y6J8 313 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 MCM3APO60318 1980 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 DOCK3Q8IZD9 2030 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 WDR81Q562E7 1941 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 PHLPP2Q6ZVD8 1323 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 ADGRA3Q8IWK6 1321 aa7.27□□□□□ -1.25
ATG4A-207ENST00000474825 RRN3P2A6NIE6 340 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 GOLGA6L6A8MZA4 724 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 H3BRB1 525 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 GPR25O00155 361 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 SLC16A4O15374 487 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 ASAP2O43150 1006 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 SEPT4O43236 478 aa7.26□□□□□ -1.25
ATG4A-207ENST00000474825 DYNC1LI2O43237 492 aaPredicted RBP7.26□□□□□ -1.25
ATG4A-207ENST00000474825 KPNA6O60684 536 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms