RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ENOX1Q8TC92 643 aaKnown RBP11.37□□□□□ -0.59
COL12A1-206ENST00000474564 CEP89Q96ST8 783 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 FUCA2Q9BTY2 467 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 NFKBIZQ9BYH8 718 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 MCOLN1Q9GZU1 580 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 CRISPLD2Q9H0B8 497 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 GBP3Q9H0R5 595 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 POLD4Q9HCU8 107 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 TBX20Q9UMR3 447 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 CTNND2Q9UQB3 1225 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 MYH11P35749 1972 aa11.37□□□□□ -0.59
COL12A1-206ENST00000474564 PPP1R3GB7ZBB8 358 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 KIAA0391O15091 583 aaKnown RBP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 CETN3O15182 167 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 TREHO43280 583 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 PRPF6O94906 941 aaKnown RBP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 GNA14O95837 355 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 TPM3P06753 285 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 SFPQP23246 707 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 LIG4P49917 911 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 FKBP3Q00688 224 aaKnown RBP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 SPAG1Q07617 926 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 MARCH8Q5T0T0 291 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 FAM43BQ6ZT52 329 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 NECAB2Q7Z6G3 386 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 USP37Q86T82 979 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 NELFCDQ8IXH7 590 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 SMYD4Q8IYR2 804 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 KIAA0319LQ8IZA0 1049 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 CSGALNACT2Q8N6G5 542 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 DNAJB3Q8WWF6 145 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 TCHPQ9BT92 498 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 MRPL4Q9BYD3 311 aaKnown RBP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 TYW1Q9NV66 732 aaKnown RBP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 PRMT7Q9NVM4 692 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-206ENST00000474564 GINS2Q9Y248 185 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 FRMD4BQ9Y2L6 1034 aa11.36□□□□□ -0.59
COL12A1-206ENST00000474564 HNRNPDLO14979 420 aaKnown RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 VTNP04004 478 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 PTMAP06454 111 aaKnown RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 MYBP10242 640 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 THPOP40225 353 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 CRYBB1P53674 252 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 SOX10P56693 466 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 STX17P56962 302 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 PTENP60484 403 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 PRPF4BQ13523 1007 aaKnown RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 CAPSQ13938 189 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 MYBPC2Q14324 1141 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 KYAT1Q16773 422 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 BMT2Q1RMZ1 405 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 EDRF1Q3B7T1 1238 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 ZC2HC1CQ53FD0 456 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 CENPPQ6IPU0 288 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 GDF6Q6KF10 455 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 EPM2AIP1Q7L775 607 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 SERINC5Q86VE9 423 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 CREBRFQ8IUR6 639 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 AOPEPQ8N6M6 819 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 USP38Q8NB14 1042 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 KIAA0895Q8NCT3 520 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 TMEM161BQ8NDZ6 487 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 ASAP3Q8TDY4 903 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 SCFD1Q8WVM8 642 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 HPS3Q969F9 1004 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-206ENST00000474564 PRIMPOLQ96LW4 560 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 ADPGKQ9BRR6 497 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 C11orf49Q9H6J7 331 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 CBX8Q9HC52 389 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 KIAA1586Q9HCI6 787 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 ARHGAP28Q9P2N2 729 aa11.35□□□□□ -0.59
COL12A1-206ENST00000474564 A0A087WZ62 844 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 PARNO95453 639 aaKnown RBP11.34□□□□□ -0.59
COL12A1-206ENST00000474564 LDHAP00338 332 aaKnown RBP11.34□□□□□ -0.59
COL12A1-206ENST00000474564 PRKCBP05771 671 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 BMP6P22004 513 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 HOXC8P31273 242 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 GPC3P51654 580 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 ADAM17P78536 824 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 MRPS6P82932 125 aaKnown RBP11.34□□□□□ -0.59
COL12A1-206ENST00000474564 CCDC173Q0VFZ6 552 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 ADAM9Q13443 819 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 ARMCX5Q6P1M9 558 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 ZPBP2Q6X784 338 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 C11orf57Q6ZUT1 292 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-206ENST00000474564 CATSPER4Q7RTX7 472 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 RPAINQ86UA6 219 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 CAGE1Q8TC20 777 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 KCNN1Q92952 543 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 CEP63Q96MT8 703 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 CTAGE1Q96RT6 745 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 FDXACB1Q9BRP7 624 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-206ENST00000474564 CELF4Q9BZC1 486 aaKnown RBP11.34□□□□□ -0.59
COL12A1-206ENST00000474564 THAP9Q9H5L6 903 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 METTL14Q9HCE5 456 aaKnown RBP11.34□□□□□ -0.59
COL12A1-206ENST00000474564 TRAF3IP3Q9Y228 551 aa11.34□□□□□ -0.59
COL12A1-206ENST00000474564 TRPV2Q9Y5S1 764 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms