RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 NT5C3AQ9H0P0 336 aa11.95□□□□□ -0.5
RNF220-210ENST00000474394 POLR3FQ9H1D9 316 aaPredicted RBP11.95□□□□□ -0.5
RNF220-210ENST00000474394 BHMT2Q9H2M3 363 aa11.95□□□□□ -0.5
RNF220-210ENST00000474394 ELAC1Q9H777 363 aaKnown RBP11.95□□□□□ -0.5
RNF220-210ENST00000474394 CHST12Q9NRB3 414 aa11.95□□□□□ -0.5
RNF220-210ENST00000474394 TRIOO75962 3097 aa11.95□□□□□ -0.5
RNF220-210ENST00000474394 CACNA1AO00555 2505 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 ADGRA3Q8IWK6 1321 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 RFXAPO00287 272 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 SLC26A4O43511 780 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 EYA4O95677 639 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 CYP11B2P19099 503 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 LONP1P36776 959 aaKnown RBP11.94□□□□□ -0.5
RNF220-210ENST00000474394 UBA7P41226 1012 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 PTENP60484 403 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 FAM189BP81408 668 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 POU5F1BQ06416 359 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 BTG3Q14201 252 aaPredicted RBP11.94□□□□□ -0.5
RNF220-210ENST00000474394 PCBP1Q15365 356 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■□□ 17.3
RNF220-210ENST00000474394 ZRSR1Q15695 479 aaKnown RBP11.94□□□□□ -0.5
RNF220-210ENST00000474394 HYIQ5T013 277 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 FAM102BQ5T8I3 360 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 FAM173BQ6P4H8 233 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 CMTR2Q8IYT2 770 aaKnown RBP11.94□□□□□ -0.5
RNF220-210ENST00000474394 CRIPAKQ8N1N5 446 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 ASAP3Q8TDY4 903 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 MMTAG2Q9BU76 263 aaKnown RBP11.94□□□□□ -0.5
RNF220-210ENST00000474394 RC3H2Q9HBD1 1191 aaKnown RBP11.94□□□□□ -0.5
RNF220-210ENST00000474394 TMEM161AQ9NX61 479 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 MTUS1Q9ULD2 1270 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 PIN4Q9Y237 131 aaKnown RBP11.94□□□□□ -0.5
RNF220-210ENST00000474394 CLIC4Q9Y696 253 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 COL4A6Q14031 1691 aa11.94□□□□□ -0.5
RNF220-210ENST00000474394 C5orf42Q9H799 3197 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 A0A0U1RQF3 1178 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 E9PMD0 336 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 HOXA2O43364 376 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 ERLIN2O94905 339 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 SKIP12755 728 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 ALADP13716 330 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 GLRA2P23416 452 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 NCBP1Q09161 790 aaKnown RBP11.93□□□□□ -0.5
RNF220-210ENST00000474394 CAPSQ13938 189 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 PTPAQ15257 358 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 TWF2Q6IBS0 349 aaKnown RBP11.93□□□□□ -0.5
RNF220-210ENST00000474394 SPRED2Q7Z698 418 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 CABP7Q86V35 215 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
RNF220-210ENST00000474394 TMEM192Q8IY95 271 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 SPRYD3Q8NCJ5 442 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 FBXO22Q8NEZ5 403 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 CALML4Q96GE6 196 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 C17orf80Q9BSJ5 609 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 NFKBIZQ9BYH8 718 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 MINDY3Q9H8M7 445 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 GPRC5CQ9NQ84 441 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 AGPAT5Q9NUQ2 364 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 RWDD3Q9Y3V2 267 aa11.93□□□□□ -0.5
RNF220-210ENST00000474394 EPOPA6NHQ4 379 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 LRRIQ4A6NIV6 560 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 INO80B-WBP1J3KQ70 363 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 EOMESO95936 686 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 RAB27AP51159 221 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 FOXK2Q01167 660 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 CEBPZQ03701 1054 aaKnown RBP11.92□□□□□ -0.5
RNF220-210ENST00000474394 GRB10Q13322 594 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 PPP2R5AQ15172 486 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
RNF220-210ENST00000474394 EPC2Q52LR7 807 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 ZBTB8OSQ8IWT0 167 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 GJD3Q8N144 294 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 RASSF8Q8NHQ8 419 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 KIFAP3Q92845 792 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 IFT74Q96LB3 600 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 ZNF396Q96N95 335 aaPredicted RBP11.92□□□□□ -0.5
RNF220-210ENST00000474394 PNMA5Q96PV4 448 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 TRAIPQ9BWF2 469 aa11.92□□□□□ -0.5
RNF220-210ENST00000474394 TBKBP1A7MCY6 615 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 SSBP05455 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
RNF220-210ENST00000474394 RB1P06400 928 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 ZSCAN22P10073 491 aaPredicted RBP11.91□□□□□ -0.5
RNF220-210ENST00000474394 MARCKSP29966 332 aaPredicted RBP11.91□□□□□ -0.5
RNF220-210ENST00000474394 AXLP30530 894 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 CTNNB1P35222 781 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 BMPR1AP36894 532 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 GATMP50440 423 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 GRIN1Q05586 938 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 TMEM119Q4V9L6 283 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 FOXD4L5Q5VV16 416 aaPredicted RBP11.91□□□□□ -0.5
RNF220-210ENST00000474394 KCNK18Q7Z418 384 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 ABI1Q8IZP0 508 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 RNF169Q8NCN4 708 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 FOXD4L4Q8WXT5 416 aaPredicted RBP11.91□□□□□ -0.5
RNF220-210ENST00000474394 CLP1Q92989 425 aaKnown RBP11.91□□□□□ -0.5
RNF220-210ENST00000474394 USP28Q96RU2 1077 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 PLIN2Q99541 437 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 TMEM117Q9H0C3 514 aa11.91□□□□□ -0.5
RNF220-210ENST00000474394 C2orf40Q9H1Z8 148 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms