RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ADRB1P08588 477 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 PDCP20941 246 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 PDE6BP35913 854 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 CACNB3P54284 484 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 ERVFC1P60507 584 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 PRR5P85299 388 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 CDK17Q00537 523 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 MALLQ13021 153 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 TIGD5Q53EQ6 642 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 HDAC10Q969S8 669 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 COA7Q96BR5 231 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 INTS4Q96HW7 963 aaKnown RBP5.33□□□□□ -1.56
BRCA1-212ENST00000473961 TMEM209Q96SK2 561 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 ELAC2Q9BQ52 826 aaKnown RBP5.33□□□□□ -1.56
BRCA1-212ENST00000473961 BTBD2Q9BX70 525 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 GTPBP4Q9BZE4 634 aaKnown RBP5.33□□□□□ -1.56
BRCA1-212ENST00000473961 OR10A5Q9H207 317 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 SEMA4AQ9H3S1 761 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 MTG2Q9H4K7 406 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 DDX21Q9NR30 783 aaKnown RBP eCLIP5.33□□□□□ -1.56
BRCA1-212ENST00000473961 DLL4Q9NR61 685 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 FTSJ1Q9UET6 329 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 ZNF839A8K0R7 811 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 FAM171A2A8MVW0 826 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 HRKO00198 91 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 CUTAO60888 179 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 OPHN1O60890 802 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 MAFO75444 373 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-212ENST00000473961 HRGP04196 525 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 RHCEP18577 417 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 TRHRP34981 398 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-212ENST00000473961 ECE1P42892 770 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 RGS3P49796 1198 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 GJA9P57773 515 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 RHDQ02161 417 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 ZNF267Q14586 743 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-212ENST00000473961 PLEKHN1Q494U1 663 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-212ENST00000473961 IL31Q6EBC2 164 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 LMBR1LQ6UX01 489 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 CCDC149Q6ZUS6 474 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 PPM1NQ8N819 430 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 MARCH10Q8NA82 808 aaPredicted RBP5.32□□□□□ -1.56
BRCA1-212ENST00000473961 ZBTB34Q8NCN2 500 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 ACRBPQ8NEB7 543 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 GAB3Q8WWW8 586 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 SHISA4Q96DD7 197 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 SLC2A13Q96QE2 648 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 ACO2Q99798 780 aaKnown RBP5.32□□□□□ -1.56
BRCA1-212ENST00000473961 NOL10Q9BSC4 688 aaKnown RBP5.32□□□□□ -1.56
BRCA1-212ENST00000473961 RNF32Q9H0A6 362 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 C19orf73Q9NVV2 129 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 USP18Q9UMW8 372 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 FAM50BQ9Y247 325 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 PTPN22Q9Y2R2 807 aa5.32□□□□□ -1.56
BRCA1-212ENST00000473961 CFAP20Q9Y6A4 193 aaKnown RBP5.32□□□□□ -1.56
BRCA1-212ENST00000473961 IFRD1O00458 451 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-212ENST00000473961 TPP1O14773 563 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 CREB3O43889 395 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 CYP7B1O75881 506 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 LRG1P02750 347 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 NCAM1P13591 858 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 MC4RP32245 332 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 HTR3AP46098 478 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 NEK3P51956 506 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 PFKPQ01813 784 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 MAN2A1Q16706 1144 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 DGKDQ16760 1214 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 HSP90AB4PQ58FF6 505 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 DARS2Q6PI48 645 aaKnown RBP5.31□□□□□ -1.56
BRCA1-212ENST00000473961 BTNL9Q6UXG8 535 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 CXXC5Q7LFL8 322 aaKnown RBP5.31□□□□□ -1.56
BRCA1-212ENST00000473961 BMP8AQ7Z5Y6 402 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 IRF2BP1Q8IU81 584 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 PRR18Q8N4B5 295 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 ENAHQ8N8S7 591 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-212ENST00000473961 CPA5Q8WXQ8 436 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 PITHD1Q9GZP4 211 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-212ENST00000473961 TMEM60Q9H2L4 133 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 EPB41L4BQ9H329 900 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 GREM2Q9H772 168 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 DCP1AQ9NPI6 582 aaPredicted RBP5.31□□□□□ -1.56
BRCA1-212ENST00000473961 TUBD1Q9UJT1 453 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 FBXO10Q9UK96 956 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 WASF3Q9UPY6 502 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 DNM3Q9UQ16 869 aa5.31□□□□□ -1.56
BRCA1-212ENST00000473961 A0A0A6YYJ9 748 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 SLC16A6O15403 523 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 MGEA5O60502 916 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 CYP2C8P10632 490 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 WASP42768 502 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 AK2P54819 239 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 MEF2AQ02078 507 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-212ENST00000473961 TRIM25Q14258 630 aaKnown RBP5.3□□□□□ -1.56
BRCA1-212ENST00000473961 NOLC1Q14978 699 aaKnown RBP eCLIP5.3□□□□□ -1.56
BRCA1-212ENST00000473961 TARBP2Q15633 366 aaKnown RBP5.3□□□□□ -1.56
BRCA1-212ENST00000473961 ADRM1Q16186 407 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 CCDC157Q569K6 752 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 CD300LDQ6UXZ3 194 aa5.3□□□□□ -1.56
BRCA1-212ENST00000473961 DAAM2Q86T65 1068 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms