RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ST6GALNAC4Q9H4F1 302 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 TYW1Q9NV66 732 aaKnown RBP11.81□□□□□ -0.52
SP140-208ENST00000473711 TAB2Q9NYJ8 693 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 LIMA1Q9UHB6 759 aaKnown RBP11.81□□□□□ -0.52
SP140-208ENST00000473711 TRAF3IP3Q9Y228 551 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 UBE4BO95155 1302 aa11.81□□□□□ -0.52
SP140-208ENST00000473711 IGKV6-21A0A0C4DH24 114 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 DENND3A2RUS2 1198 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 MYADML2A6NDP7 307 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 LRRIQ4A6NIV6 560 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 CETN3O15182 167 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 HMGCRP04035 888 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 C6orf222P0C671 652 aaPredicted RBP11.8□□□□□ -0.52
SP140-208ENST00000473711 RARBP10826 455 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 CDC25BP30305 580 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 MTIF2P46199 727 aaKnown RBP11.8□□□□□ -0.52
SP140-208ENST00000473711 PSEN2P49810 448 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 GJA9P57773 515 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 PPFIA1Q13136 1202 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 ADAM9Q13443 819 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 NR1I3Q14994 352 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 PPP2R5AQ15172 486 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 GRIK4Q16099 956 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 PTPN21Q16825 1174 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 EDRF1Q3B7T1 1238 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 LRRC55Q6ZSA7 311 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 APTXQ7Z2E3 356 aaKnown RBP11.8□□□□□ -0.52
SP140-208ENST00000473711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.8□□□□□ -0.52
SP140-208ENST00000473711 FILIP1Q7Z7B0 1213 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 DEPTORQ8TB45 409 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 TCP11Q8WWU5 503 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
SP140-208ENST00000473711 KAT2BQ92831 832 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 CTAGE1Q96RT6 745 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 JPH2Q9BR39 696 aaPredicted RBP11.8□□□□□ -0.52
SP140-208ENST00000473711 CRISPLD2Q9H0B8 497 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 TMEM206Q9H813 350 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 SETD4Q9NVD3 440 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 SUCLA2Q9P2R7 463 aaPredicted RBP11.8□□□□□ -0.52
SP140-208ENST00000473711 KCNG1Q9UIX4 513 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 TBX20Q9UMR3 447 aa11.8□□□□□ -0.52
SP140-208ENST00000473711 ZMYM2Q9UBW7 1377 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 A0A1B0GTH6 734 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 LRRC10BA6NIK2 292 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 N4BP3O15049 544 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 MAGEB2O15479 319 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 TEX33O43247 280 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 GAS2O43903 313 aaKnown RBP11.79□□□□□ -0.52
SP140-208ENST00000473711 C22orf31O95567 290 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 PGK1P00558 417 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 NR3C1P04150 777 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 PTMAP06454 111 aaKnown RBP11.79□□□□□ -0.52
SP140-208ENST00000473711 SRGAP2CP0DJJ0 459 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 NR2F2P24468 414 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 EEF1GP26641 437 aaKnown RBP11.79□□□□□ -0.52
SP140-208ENST00000473711 NAMPTP43490 491 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 CLCN3P51790 818 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 LAMTOR4Q0VGL1 99 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 MFSD10Q14728 455 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 KIAA0753Q2KHM9 967 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 FILIP1LQ4L180 1135 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 MTHFD1LQ6UB35 978 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 HS2ST1Q7LGA3 356 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 ZC3H3Q8IXZ2 948 aaKnown RBP11.79□□□□□ -0.52
SP140-208ENST00000473711 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 PXYLP1Q8TE99 480 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 CEP63Q96MT8 703 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 GBP3Q9H0R5 595 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 SPC25Q9HBM1 224 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
SP140-208ENST00000473711 INTS13Q9NVM9 706 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 EXOC7Q9UPT5 735 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 TRIM17Q9Y577 477 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 ADGRA3Q8IWK6 1321 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 COL1A2P08123 1366 aa11.79□□□□□ -0.52
SP140-208ENST00000473711 RRN3P2A6NIE6 340 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 TISP43B9A030 160 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 H0YCG3 227 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 HAS3O00219 553 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 PES1O00541 588 aaKnown RBP11.78□□□□□ -0.52
SP140-208ENST00000473711 KPNA6O60684 536 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 F2P00734 622 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 TPM3P06753 285 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 GJB1P08034 283 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 SMIM10L2AP0DMW4 78 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 SMIM10L2BP0DMW5 78 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 PRKCSHP14314 528 aaPredicted RBP11.78□□□□□ -0.52
SP140-208ENST00000473711 RPL13P26373 211 aaKnown RBP11.78□□□□□ -0.52
SP140-208ENST00000473711 DNM2P50570 870 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 PRMT2P55345 433 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 CAPSQ13938 189 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 MXD4Q14582 209 aaPredicted RBP11.78□□□□□ -0.52
SP140-208ENST00000473711 CCDC40Q4G0X9 1142 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 CEP135Q66GS9 1140 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 TAS1R3Q7RTX0 852 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 TMC6Q7Z403 805 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 RHPN2Q8IUC4 686 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 GOLGA5Q8TBA6 731 aa11.78□□□□□ -0.52
SP140-208ENST00000473711 PSPC1Q8WXF1 523 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms