RNA–Protein interactions for RNA: ENST00000472398.5

TTC3-214, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,305 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-214ENST00000472398 TSPAN10Q9H1Z9 355 aaPredicted RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 VPS11Q9H270 941 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 GHITMQ9H3K2 345 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 MROH8Q9H579 483 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 SYNCQ9H7C4 482 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 TTC12Q9H892 705 aaPredicted RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 EHMT1Q9H9B1 1298 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 TOMM22Q9NS69 142 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.54□□□□□ -1.84
TTC3-214ENST00000472398 COQ3Q9NZJ6 369 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 CALCOCO1Q9P1Z2 691 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 CCDC39Q9UFE4 941 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 PCOLCE2Q9UKZ9 415 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 DENND2AQ9ULE3 1009 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 TRIM33Q9UPN9 1127 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 ATP11BQ9Y2G3 1177 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 TMED5Q9Y3A6 229 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 TIMM22Q9Y584 194 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 USP3Q9Y6I4 520 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 SESN1Q9Y6P5 492 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 NSD2O96028 1365 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 A6NHS1 94 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 CAPN14A8MX76 684 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 SGK1O00141 431 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 EML1O00423 815 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 NPC1O15118 1278 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 NCK2O43639 380 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 TSC22D2O75157 780 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 ATP5BP06576 529 aaKnown RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 PDHBP11177 359 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 MAPK4P31152 587 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 CPA2P48052 419 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 HNMTP50135 292 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 HADHBP55084 474 aaKnown RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 GTF2H3Q13889 308 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 LRP8Q14114 963 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 TLR1Q15399 786 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 ATP2B3Q16720 1220 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 C15orf59Q2T9L4 293 aaPredicted RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 ANO4Q32M45 955 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 INAVAQ3KP66 663 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 YOD1Q5VVQ6 348 aaPredicted RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 LMBR1LQ6UX01 489 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 ISLR2Q6UXK2 745 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 HOOK3Q86VS8 718 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 PPFIBP1Q86W92 1011 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 CREG2Q8IUH2 290 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 HID1Q8IV36 788 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 FBXO15Q8NCQ5 510 aaPredicted RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 SLC35G2Q8TBE7 412 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 TEKT4Q8WW24 435 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 KRT35Q92764 455 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 SLC35B4Q969S0 331 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 NXPE3Q969Y0 559 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 FUBP3Q96I24 572 aaKnown RBP eCLIP3.54□□□□□ -1.84
TTC3-214ENST00000472398 PPP1R13BQ96KQ4 1090 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 DACH2Q96NX9 599 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 ACO2Q99798 780 aaKnown RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 SH3GL3Q99963 347 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 MENTQ9BUN1 341 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 MTMR12Q9C0I1 747 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 NSRP1Q9H0G5 558 aaKnown RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 SMARCAD1Q9H4L7 1026 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 EHD1Q9H4M9 534 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 RAB6BQ9NRW1 208 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 INTS10Q9NVR2 710 aaKnown RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 NSMCE4AQ9NXX6 385 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 IL1RAPL1Q9NZN1 696 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 MARK1Q9P0L2 795 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 MALT1Q9UDY8 824 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 SERTAD1Q9UHV2 236 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 MRPL11Q9Y3B7 192 aaKnown RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 GPC6Q9Y625 555 aaPredicted RBP3.54□□□□□ -1.84
TTC3-214ENST00000472398 AP1M2Q9Y6Q5 423 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 ZNF804BA4D1E1 1349 aa3.54□□□□□ -1.84
TTC3-214ENST00000472398 MAFKO60675 156 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 PGM3O95394 542 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 LTFP02788 710 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 ZBTB48P10074 688 aaPredicted RBP3.53□□□□□ -1.84
TTC3-214ENST00000472398 VAV1P15498 845 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 ENDOUP21128 410 aaKnown RBP3.53□□□□□ -1.84
TTC3-214ENST00000472398 PSMA4P25789 261 aaKnown RBP3.53□□□□□ -1.84
TTC3-214ENST00000472398 CDC25CP30307 473 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 RDXP35241 583 aaKnown RBP3.53□□□□□ -1.84
TTC3-214ENST00000472398 TCF7P36402 384 aaPredicted RBP3.53□□□□□ -1.84
TTC3-214ENST00000472398 OR1G1P47890 313 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 IFNAR2P48551 515 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 ETV1P50549 477 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 MYL6P60660 151 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 ARHGAP8P85298 464 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 TFAP4Q01664 338 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 ICA1Q05084 483 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 ZBTB16Q05516 673 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 C19orf57Q0VDD7 668 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 TRPC3Q13507 836 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 CRY1Q16526 586 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 GEN1Q17RS7 908 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 CEP135Q66GS9 1140 aa3.53□□□□□ -1.84
TTC3-214ENST00000472398 MRPL14Q6P1L8 145 aaKnown RBP3.53□□□□□ -1.84
TTC3-214ENST00000472398 IL27RAQ6UWB1 636 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms