RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 PLS3P13797 630 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 TM4SF1P30408 202 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 GARSP41250 739 aaKnown RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 ACTR2P61160 394 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 HSPH1Q92598 858 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 PRMT7Q9NVM4 692 aaPredicted RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 AGAP1Q9UPQ3 857 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 VIL1P09327 827 aaKnown RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 RALAP11233 206 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 TMEM132DQ14C87 1099 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 PPP6R3Q5H9R7 873 aaPredicted RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 FKBP1CQ5VVH2 108 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 BZW1Q7L1Q6 419 aaKnown RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 CCDC170Q8IYT3 715 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 INTS2Q9H0H0 1204 aaKnown RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 NHEJ1Q9H9Q4 299 aaPredicted RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.16□□□□□ -0.3
IRF1-208ENST00000472045 AAASQ9NRG9 546 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 HPCAL4Q9UM19 191 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 PTPN22Q9Y2R2 807 aa13.16□□□□□ -0.3
IRF1-208ENST00000472045 NPHP3-ACAD11A0A0J9YXS1 232 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 RBP5P82980 135 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 KRT71Q3SY84 523 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
IRF1-208ENST00000472045 SCYL1Q96KG9 808 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 CCSER1Q9C0I3 900 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 ATP11BQ9Y2G3 1177 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 CDC25BP30305 580 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 DEFB115Q30KQ5 88 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 ZNF746Q6NUN9 644 aaPredicted RBP13.15□□□□□ -0.3
IRF1-208ENST00000472045 APPL2Q8NEU8 664 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 S100BP04271 92 aaPredicted RBP13.15□□□□□ -0.3
IRF1-208ENST00000472045 SUPT20HL2P0C7V6 817 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 DSG3P32926 999 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 FBXL13Q8NEE6 735 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 PPP4R1Q8TF05 950 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 TRIM62Q9BVG3 475 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 ASNSD1Q9NWL6 643 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 CEP72Q9P209 647 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 APOEP02649 317 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 GNA15P30679 374 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 GUCY2FP51841 1108 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 ATF7IP2Q5U623 682 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 BTBD8Q5XKL5 378 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 NUDT18Q6ZVK8 323 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 SOCS4Q8WXH5 440 aa13.15□□□□□ -0.3
IRF1-208ENST00000472045 CACYBPQ9HB71 228 aaKnown RBP13.15□□□□□ -0.3
IRF1-208ENST00000472045 PRR29P0C7W0 189 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 TRIM49P0CI25 452 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 TRIM49CP0CI26 452 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 SDC4P31431 198 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 GRIK1P39086 918 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 CASP7P55210 303 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 INHBEP58166 350 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
IRF1-208ENST00000472045 LMBRD2Q68DH5 695 aaPredicted RBP13.14□□□□□ -0.31
IRF1-208ENST00000472045 ENOSF1Q7L5Y1 443 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 IDI2Q9BXS1 227 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 EMSYQ7Z589 1322 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 STRNO43815 780 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 OR1G1P47890 313 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 KRT17Q04695 432 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 SNX1Q13596 522 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 LLGL1Q15334 1064 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 WDR72Q3MJ13 1102 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 NOTUMQ6P988 496 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 ADGRA1Q86SQ6 560 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 RHOT2Q8IXI1 618 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 ANKEF1Q9NU02 776 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 ADAMTS1Q9UHI8 967 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 PRRG1O14668 218 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 CD4P01730 458 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 U2AF2P26368 475 aaKnown RBP eCLIP13.14□□□□□ -0.31
IRF1-208ENST00000472045 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
IRF1-208ENST00000472045 MICALL1Q8N3F8 863 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 REEP2Q9BRK0 252 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 CNOT8Q9UFF9 292 aaKnown RBP13.14□□□□□ -0.31
IRF1-208ENST00000472045 SNX9Q9Y5X1 595 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 F8W8V4 182 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 PDXKO00764 312 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 ZBED1O96006 694 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 ACOT2P49753 483 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 SEPT6Q14141 434 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 SPTLC3Q9NUV7 552 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 HSPBP1Q9NZL4 362 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
IRF1-208ENST00000472045 NKRFO15226 690 aaKnown RBP eCLIP13.13□□□□□ -0.31
IRF1-208ENST00000472045 KPNA6O60684 536 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 SKIP12755 728 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 TROAPQ12815 778 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 APOBEC3HQ6NTF7 200 aaKnown RBP13.13□□□□□ -0.31
IRF1-208ENST00000472045 CCDC121Q6ZUS5 278 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 C11orf70Q9BRQ4 267 aa13.13□□□□□ -0.31
IRF1-208ENST00000472045 FBXO2Q9UK22 296 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms