RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 NLRP4Q96MN2 994 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 KIF2CQ99661 725 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 SMOC2Q9H3U7 446 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 NRDE2Q9H7Z3 1164 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 CEP131Q9UPN4 1083 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 FNDC1Q4ZHG4 1894 aaPredicted RBP9.06□□□□□ -0.96
USP48-207ENST00000471752 PLXNA4Q9HCM2 1894 aa9.06□□□□□ -0.96
USP48-207ENST00000471752 C2orf71A6NGG8 1288 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 LOC730098B7Z3J9 87 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 DCXO43602 365 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 MYBP10242 640 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 IGFBP6P24592 240 aaPredicted RBP9.05□□□□□ -0.96
USP48-207ENST00000471752 SLC11A1P49279 550 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 BCAR1P56945 870 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 PLCB3Q01970 1234 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 COASYQ13057 564 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 EPHA7Q15375 998 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 PUS10Q3MIT2 529 aaKnown RBP9.05□□□□□ -0.96
USP48-207ENST00000471752 GALNT17Q6IS24 598 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 MOXD1Q6UVY6 613 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 TPH2Q8IWU9 490 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 SMG8Q8ND04 991 aaKnown RBP9.05□□□□□ -0.96
USP48-207ENST00000471752 RDM1Q8NG50 284 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 PIGOQ8TEQ8 1089 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 SUSD6Q92537 303 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 RABGGTAQ92696 567 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 CPB2Q96IY4 423 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 RPGRIP1Q96KN7 1286 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 PHF12Q96QT6 1004 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 HSD17B14Q9BPX1 270 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 TCF25Q9BQ70 676 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 EIF2AK1Q9BQI3 630 aaKnown RBP9.05□□□□□ -0.96
USP48-207ENST00000471752 LXNQ9BS40 222 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 EIF2AQ9BY44 585 aaKnown RBP9.05□□□□□ -0.96
USP48-207ENST00000471752 GCOM2Q9BZD3 368 aaPredicted RBP9.05□□□□□ -0.96
USP48-207ENST00000471752 GBP3Q9H0R5 595 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 DHX33Q9H6R0 707 aaKnown RBP9.05□□□□□ -0.96
USP48-207ENST00000471752 AAASQ9NRG9 546 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 TBC1D13Q9NVG8 400 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 SPG21Q9NZD8 308 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 PIN4Q9Y237 131 aaKnown RBP9.05□□□□□ -0.96
USP48-207ENST00000471752 INPP5FQ9Y2H2 1132 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 HES2Q9Y543 173 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 COL4A3BPQ9Y5P4 624 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 STK36Q9NRP7 1315 aa9.05□□□□□ -0.96
USP48-207ENST00000471752 MYH9P35579 1960 aaKnown RBP9.04□□□□□ -0.96
USP48-207ENST00000471752 RALGAPA2Q2PPJ7 1873 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 WDR81Q562E7 1941 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 B4GALT5O43286 388 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 NCK2O43639 380 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 CLASP2O75122 1294 aaKnown RBP9.04□□□□□ -0.96
USP48-207ENST00000471752 CXCL14O95715 111 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 P4HBP07237 508 aaKnown RBP9.04□□□□□ -0.96
USP48-207ENST00000471752 GALTP07902 379 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 SPATA31C1P0DKV0 1188 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 EPCAMP16422 314 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 YWHABP31946 246 aaKnown RBP9.04□□□□□ -0.96
USP48-207ENST00000471752 PLA2G5P39877 138 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 TECP42680 631 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 TXKP42681 527 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 NBR1Q14596 966 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 ECM1Q16610 540 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 AMHR2Q16671 573 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 XKR9Q5GH70 373 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 IER5LQ5T953 404 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 TWF2Q6IBS0 349 aaKnown RBP9.04□□□□□ -0.96
USP48-207ENST00000471752 ANKRD54Q6NXT1 300 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 MAEAQ7L5Y9 396 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 CATSPER4Q7RTX7 472 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 DIS3L2Q8IYB7 885 aaKnown RBP9.04□□□□□ -0.96
USP48-207ENST00000471752 MRPL43Q8N983 215 aaKnown RBP9.04□□□□□ -0.96
USP48-207ENST00000471752 FAM20AQ96MK3 541 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 ZNF558Q96NG5 402 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 MTMR9Q96QG7 549 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 PHOX2BQ99453 314 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 C22orf23Q9BZE7 217 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 GPRC5CQ9NQ84 441 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 ENTPD7Q9NQZ7 604 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 CACNG4Q9UBN1 327 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 PRKAG3Q9UGI9 489 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 PCDHB2Q9Y5E7 798 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 FRYLO94915 3013 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 CACNA1HO95180 2353 aa9.04□□□□□ -0.96
USP48-207ENST00000471752 POTEMA6NI47 508 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 ZC3H11AO75152 810 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP48-207ENST00000471752 MED24O75448 989 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 EOMESO95936 686 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 PDGFBP01127 241 aaPredicted RBP9.03□□□□□ -0.96
USP48-207ENST00000471752 POMCP01189 267 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 EDN1P05305 212 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 SSBP05455 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP48-207ENST00000471752 LAG3P18627 525 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 KRT2P35908 639 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 ANAPC15P60006 121 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 UBE3AQ05086 875 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 EMC2Q15006 297 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 ZNF174Q15697 407 aa9.03□□□□□ -0.96
USP48-207ENST00000471752 CPLX2Q6PUV4 134 aaKnown RBP9.03□□□□□ -0.96
USP48-207ENST00000471752 MRPL10Q7Z7H8 261 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms