RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 CEP170P1Q96L14 293 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
COL4A3-204ENST00000469504 LXNQ9BS40 222 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 FAM105AQ9NUU6 356 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-204ENST00000469504 BARX2Q9UMQ3 279 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-204ENST00000469504 USP15Q9Y4E8 981 aaPredicted RBP12.27□□□□□ -0.45
COL4A3-204ENST00000469504 COL4A3BPQ9Y5P4 624 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 FAM86C2PA6NEL3 165 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 AK2P54819 239 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 POU5F1BQ06416 359 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 MXD4Q14582 209 aaPredicted RBP12.26□□□□□ -0.45
COL4A3-204ENST00000469504 TPRNQ4KMQ1 711 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 PLPP4Q5VZY2 271 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 RNF135Q8IUD6 432 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 MRPL43Q8N983 215 aaKnown RBP12.26□□□□□ -0.45
COL4A3-204ENST00000469504 HELQQ8TDG4 1101 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 HAS1Q92839 578 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 GTF3C6Q969F1 213 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 MFSD14AQ96MC6 490 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 NLRP4Q96MN2 994 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 NECTIN4Q96NY8 510 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 IFT122Q9HBG6 1241 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 UBN1Q9NPG3 1134 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 AGPAT5Q9NUQ2 364 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 KANSL3Q9P2N6 904 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 IRAK3Q9Y616 596 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 CNTNAP2Q9UHC6 1331 aa12.26□□□□□ -0.45
COL4A3-204ENST00000469504 TMEM150BA6NC51 233 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 PER2O15055 1255 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 LYPLA2O95372 231 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 CTDNEP1O95476 244 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 FGFR4P22455 802 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 AXLP30530 894 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 BCAR1P56945 870 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 ITIH3Q06033 890 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 SPIRE1Q08AE8 756 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 NCBP1Q09161 790 aaKnown RBP12.25□□□□□ -0.45
COL4A3-204ENST00000469504 TRIM29Q14134 588 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 NOMO2Q5JPE7 1267 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 PLA2G4FQ68DD2 849 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 ANKRD54Q6NXT1 300 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 BMP8AQ7Z5Y6 402 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 URGCPQ8TCY9 931 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 EDAQ92838 391 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 CCDC51Q96ER9 411 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 ZNF668Q96K58 619 aaPredicted RBP12.25□□□□□ -0.45
COL4A3-204ENST00000469504 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 RAPGEFL1Q9UHV5 662 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 PCDHA12Q9UN75 941 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 PLXNA4Q9HCM2 1894 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 WDR81Q562E7 1941 aa12.25□□□□□ -0.45
COL4A3-204ENST00000469504 C2orf71A6NGG8 1288 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 DGAT1O75907 488 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 XRCC6P12956 609 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL4A3-204ENST00000469504 TECP42680 631 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 NPEPPSP55786 919 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 RNASELQ05823 741 aaKnown RBP12.24□□□□□ -0.45
COL4A3-204ENST00000469504 LAMTOR4Q0VGL1 99 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 TFDP1Q14186 410 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 EMC2Q15006 297 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 ME3Q16798 604 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 NCAPH2Q6IBW4 605 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 MRPL10Q7Z7H8 261 aaKnown RBP12.24□□□□□ -0.45
COL4A3-204ENST00000469504 DDX53Q86TM3 631 aaKnown RBP12.24□□□□□ -0.45
COL4A3-204ENST00000469504 VN1R2Q8NFZ6 395 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 OXER1Q8TDS5 423 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 PRPF31Q8WWY3 499 aaKnown RBP12.24□□□□□ -0.45
COL4A3-204ENST00000469504 TNFRSF25Q93038 417 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 MTRQ99707 1265 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 SH2D3AQ9BRG2 576 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 TMEM175Q9BSA9 504 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 NFKBIZQ9BYH8 718 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 S1PR5Q9H228 398 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 ANKEF1Q9NU02 776 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 DZANK1Q9NVP4 752 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 MUTYHQ9UIF7 546 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 NR2E1Q9Y466 385 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 PCDHB2Q9Y5E7 798 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 PCDHGC5Q9Y5F6 944 aa12.24□□□□□ -0.45
COL4A3-204ENST00000469504 HIDE1A8MVS5 230 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 NEMFO60524 1076 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 ZC3H11AO75152 810 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL4A3-204ENST00000469504 CSDE1O75534 798 aaKnown RBP12.23□□□□□ -0.45
COL4A3-204ENST00000469504 OFD1O75665 1012 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 ERLIN2O94905 339 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 SLITRK3O94933 977 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 CTSAP10619 480 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 FDPSP14324 419 aaKnown RBP12.23□□□□□ -0.45
COL4A3-204ENST00000469504 ORC2Q13416 577 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-204ENST00000469504 CALCRLQ16602 461 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 XKR9Q5GH70 373 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 CES5AQ6NT32 575 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 FERMT3Q86UX7 667 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 PPFIBP1Q86W92 1011 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
COL4A3-204ENST00000469504 KSR1Q8IVT5 923 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 TMEM87AQ8NBN3 555 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 RNF149Q8NC42 400 aa12.23□□□□□ -0.45
COL4A3-204ENST00000469504 NSUN7Q8NE18 718 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms