RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 PRELID2Q8N945 189 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 ELAC2Q9BQ52 826 aaKnown RBP13.07□□□□□ -0.32
VARS2-205ENST00000469358 TXLNGYQ9BZA5 131 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 AGPAT3Q9NRZ7 376 aa13.07□□□□□ -0.32
VARS2-205ENST00000469358 RPTORQ8N122 1335 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 ATXN2Q99700 1313 aaKnown RBP13.06□□□□□ -0.32
VARS2-205ENST00000469358 G3V3G9 751 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 EXOC3O60645 756 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 TMEM253P0C7T8 217 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 GCLMP48507 274 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 SETQ01105 290 aaPredicted RBP13.06□□□□□ -0.32
VARS2-205ENST00000469358 KIAA1755Q5JYT7 1200 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 C1orf186Q6ZWK4 172 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 CCDC91Q7Z6B0 441 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 SEC14L1Q92503 715 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 FIZ1Q96SL8 496 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 MYCBPQ99417 103 aaPredicted RBP13.06□□□□□ -0.32
VARS2-205ENST00000469358 SYT11Q9BT88 431 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 TPX2Q9ULW0 747 aaKnown RBP13.06□□□□□ -0.32
VARS2-205ENST00000469358 A0A0A6YYK5 440 aaPredicted RBP13.06□□□□□ -0.32
VARS2-205ENST00000469358 A0A1W2PRG0 241 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 TMEM150BA6NC51 233 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
VARS2-205ENST00000469358 VCAM1P19320 739 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 SREBF1P36956 1147 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 CDR1P51861 262 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 MYL7Q01449 175 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 BMT2Q1RMZ1 405 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 Q4G0T1 1027 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 FAM178BQ8IXR5 827 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 TLCD1Q96CP7 247 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 TBC1D31Q96DN5 1066 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 CHMP6Q96FZ7 201 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 GRHL1Q9NZI5 618 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 BBOX1O75936 387 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 LMNB1P20700 586 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 ECE1P42892 770 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 CRKP46108 304 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 ZYXQ15942 572 aaKnown RBP13.06□□□□□ -0.32
VARS2-205ENST00000469358 ERMARDQ5T6L9 678 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 TEKT1Q969V4 418 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 PWWP2AQ96N64 755 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 HSD17B14Q9BPX1 270 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 PARVGQ9HBI0 331 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 APEX2Q9UBZ4 518 aa13.06□□□□□ -0.32
VARS2-205ENST00000469358 SLC16A3O15427 465 aaKnown RBP13.05□□□□□ -0.32
VARS2-205ENST00000469358 GH2P01242 217 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 VIMP08670 466 aaKnown RBP13.05□□□□□ -0.32
VARS2-205ENST00000469358 PYGMP11217 842 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 COMTP21964 271 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 MAPK7Q13164 816 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 LRCH2Q5VUJ6 765 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 PARP9Q8IXQ6 854 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 NEK9Q8TD19 979 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.05□□□□□ -0.32
VARS2-205ENST00000469358 CCT6BQ92526 530 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 PCDHB18PQ96TA0 734 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 DDX23Q9BUQ8 820 aaKnown RBP13.05□□□□□ -0.32
VARS2-205ENST00000469358 FAM198AQ9UFP1 575 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 ZBTB21Q9ULJ3 1066 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 IGLV3-22A0A075B6J6 115 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 GOLGA8IPA6NC78 632 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 GOLGA8JA6NMD2 632 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 PPP3CAQ08209 521 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 AP3B2Q13367 1082 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 SNX1Q13596 522 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 TRIP13Q15645 432 aaPredicted RBP13.05□□□□□ -0.32
VARS2-205ENST00000469358 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 OTOP1Q7RTM1 612 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 ZNF720Q7Z2F6 126 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 RPUSD2Q8IZ73 545 aaKnown RBP13.05□□□□□ -0.32
VARS2-205ENST00000469358 EIF1ADQ8N9N8 165 aaKnown RBP13.05□□□□□ -0.32
VARS2-205ENST00000469358 CERKQ8TCT0 537 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 FAM129AQ9BZQ8 928 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 RAB17Q9H0T7 212 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 PABPC3Q9H361 631 aaKnown RBP13.05□□□□□ -0.32
VARS2-205ENST00000469358 EMSYQ7Z589 1322 aa13.05□□□□□ -0.32
VARS2-205ENST00000469358 ARP10275 920 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 PTGIRP43119 386 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 DAB2IPQ5VWQ8 1189 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 ATXN2LQ8WWM7 1075 aaKnown RBP13.04□□□□□ -0.32
VARS2-205ENST00000469358 ZNF317Q96PQ6 595 aaPredicted RBP13.04□□□□□ -0.32
VARS2-205ENST00000469358 NAP1L4Q99733 375 aaKnown RBP13.04□□□□□ -0.32
VARS2-205ENST00000469358 FAM118BQ9BPY3 351 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 CXorf56Q9H5V9 222 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 FRMD4BQ9Y2L6 1034 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 NCANO14594 1321 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 RGS16O15492 202 aaPredicted RBP13.04□□□□□ -0.32
VARS2-205ENST00000469358 SGPL1O95470 568 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 PPP1R7Q15435 360 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 LONRF1Q17RB8 773 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 C2CD6Q53TS8 623 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 HIBCHQ6NVY1 386 aaPredicted RBP13.04□□□□□ -0.32
VARS2-205ENST00000469358 SEPT14Q6ZU15 432 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 TAX1BP1Q86VP1 789 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 AGPAT1Q99943 283 aa13.04□□□□□ -0.32
VARS2-205ENST00000469358 CBWD1Q9BRT8 395 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms