RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 ZSCAN20P17040 1043 aaPredicted RBP13.96□□□□□ -0.17
ABCF1-204ENST00000468958 HOXA11P31270 313 aaPredicted RBP13.96□□□□□ -0.17
ABCF1-204ENST00000468958 ARL2P36404 184 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 PBX3P40426 434 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 FXR2P51116 673 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■■□□ 17.3
ABCF1-204ENST00000468958 NUCB2P80303 420 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 RESTQ13127 1097 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 PTGDRQ13258 359 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 CAPSQ13938 189 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 LONRF3Q496Y0 759 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 UBXN11Q5T124 520 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 DTHD1Q6ZMT9 781 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 ADGRD2Q7Z7M1 963 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 RNF169Q8NCN4 708 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 HELQQ8TDG4 1101 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 PSPC1Q8WXF1 523 aaKnown RBP13.96□□□□□ -0.17
ABCF1-204ENST00000468958 P2RX5Q93086 422 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 HLA-CQ95604 372 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 JPH2Q9BR39 696 aaPredicted RBP13.96□□□□□ -0.17
ABCF1-204ENST00000468958 C11orf84Q9BUA3 381 aaPredicted RBP13.96□□□□□ -0.17
ABCF1-204ENST00000468958 PLVAPQ9BX97 442 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 UBE2ZQ9H832 354 aaPredicted RBP13.96□□□□□ -0.17
ABCF1-204ENST00000468958 GPRC5CQ9NQ84 441 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 PIN4Q9Y237 131 aaKnown RBP13.96□□□□□ -0.17
ABCF1-204ENST00000468958 RWDD3Q9Y3V2 267 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 PPME1Q9Y570 386 aa13.96□□□□□ -0.17
ABCF1-204ENST00000468958 TRIP11Q15643 1979 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 PP2D1A8MPX8 630 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 B4GALT3O60512 393 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
ABCF1-204ENST00000468958 F13A1P00488 732 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 MUTP22033 750 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 SFPQP23246 707 aaKnown RBP eCLIP13.95□□□□□ -0.18
ABCF1-204ENST00000468958 GLRA2P23416 452 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 LTBRP36941 435 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 PHKA2P46019 1235 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 ATP2C1P98194 919 aaPredicted RBP13.95□□□□□ -0.18
ABCF1-204ENST00000468958 HYAL1Q12794 435 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 COL19A1Q14993 1142 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 MAEAQ7L5Y9 396 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 CATSPER4Q7RTX7 472 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 EXOC8Q8IYI6 725 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 COLGALT1Q8NBJ5 622 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 RNF149Q8NC42 400 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 ADAMTS19Q8TE59 1207 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 POF1BQ8WVV4 589 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 POLR3CQ9BUI4 534 aaPredicted RBP13.95□□□□□ -0.18
ABCF1-204ENST00000468958 TMEM117Q9H0C3 514 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 LMAN2LQ9H0V9 348 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 NSUN3Q9H649 340 aaKnown RBP13.95□□□□□ -0.18
ABCF1-204ENST00000468958 TUFT1Q9NNX1 390 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 AGPAT5Q9NUQ2 364 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 CFAP45Q9UL16 551 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 COG5Q9UP83 839 aa13.95□□□□□ -0.18
ABCF1-204ENST00000468958 MORC2Q9Y6X9 1032 aaPredicted RBP13.95□□□□□ -0.18
ABCF1-204ENST00000468958 LINC01565O15544 149 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 SLC26A4O43511 780 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 DGAT1O75907 488 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 RPA1P27694 616 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 AFF1P51825 1210 aaKnown RBP13.94□□□□□ -0.18
ABCF1-204ENST00000468958 PTENP60484 403 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 CDC42EP1Q00587 391 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 DLX2Q07687 328 aaPredicted RBP13.94□□□□□ -0.18
ABCF1-204ENST00000468958 PDIA5Q14554 519 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 AMHR2Q16671 573 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 PTPROQ16827 1216 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 TIGD5Q53EQ6 642 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 FAM43BQ6ZT52 329 aaPredicted RBP13.94□□□□□ -0.18
ABCF1-204ENST00000468958 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 IGSF22Q8N9C0 903 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.94□□□□□ -0.18
ABCF1-204ENST00000468958 TCP11Q8WWU5 503 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 BSNDQ8WZ55 320 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 AK8Q96MA6 479 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 CCDC43Q96MW1 224 aaKnown RBP13.94□□□□□ -0.18
ABCF1-204ENST00000468958 MMTAG2Q9BU76 263 aaKnown RBP13.94□□□□□ -0.18
ABCF1-204ENST00000468958 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 POLR3FQ9H1D9 316 aaPredicted RBP13.94□□□□□ -0.18
ABCF1-204ENST00000468958 POLD4Q9HCU8 107 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 CHST12Q9NRB3 414 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 FAM105AQ9NUU6 356 aa13.94□□□□□ -0.18
ABCF1-204ENST00000468958 C5orf42Q9H799 3197 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 GAS2O43903 313 aaKnown RBP13.93□□□□□ -0.18
ABCF1-204ENST00000468958 TSPAN1O60635 241 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 EOMESO95936 686 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 EDN1P05305 212 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 XRCC6P12956 609 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■□□□□ 9.4
ABCF1-204ENST00000468958 KCNA5P22460 613 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 CDC25AP30304 524 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 ERVFC1P60507 584 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 MBTD1Q05BQ5 628 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 TWF2Q6IBS0 349 aaKnown RBP13.93□□□□□ -0.18
ABCF1-204ENST00000468958 AGMOQ6ZNB7 445 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 SRGAP1Q7Z6B7 1085 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 CPB2Q96IY4 423 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 INO80BQ9C086 356 aaPredicted RBP13.93□□□□□ -0.18
ABCF1-204ENST00000468958 DACT1Q9NYF0 836 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 LRWD1Q9UFC0 647 aa13.93□□□□□ -0.18
ABCF1-204ENST00000468958 DBR1Q9UK59 544 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms